Asol086789.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- stc
- Assembly
- GCA_963170755.1
- Location
- OY720679.1:10171690-10182150[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 1.7 9.7e+04 -3.3 1.6 15 19 350 354 349 354 0.81 2 6 0.074 4.4e+03 1.0 0.2 4 10 383 389 382 391 0.95 3 6 5.3e-06 0.31 14.3 12.7 4 19 398 413 396 413 0.93 4 6 0.21 1.2e+04 -0.4 1.3 5 10 438 443 438 443 0.96 5 6 8.7e-08 0.0051 20.0 13.9 1 18 449 466 449 467 0.98 6 6 1.6e-10 9.1e-06 28.8 12.8 1 19 507 525 507 525 0.99
Sequence Information
- Coding Sequence
- atgtcgaATTGGAATTCAAACAATTACTATTCTAATCGAGAGCAACTGCAGCCCAACGAATACTATTCAAATAACTATGATGCGAATGACTATGTGAATTTTTCTGGCACAACTTTTTATAACAGTTCTTTCAACGATAATCGTGAAAATTTTTATGGATATAATTCGAATGAGTCAGCTTCAAACACGGCAAATCAACCTGGGCCTTCTATAAAGGACGATTTAAGGCATATAGATATTAGCCGTTCTAATTTAACTCCGACGGCTGCAGAATTTAAACCTAGAAACATAAGTGTTCCTTTAGAAAATAACGTATCCAATGGTACAGTTAGACGTGTACAGATTAATCAATATCGTACCAAAAAATCCAGTTCAATTAATTCTTCACATGAAAATACCTCGAGTGCCAACACGAAACAGATTAAATACCACGAACCAATTAATACAGACAAAATAGAGCAAAAGAGTTCTAGGGAATCTAAaggtaataattttaaaagtaaacCGTCTTCTGCAAACACCGAAGACCTACGTAACGAGGAAAGTGGAAAATATCAAGCTGATAGGGATCTGAGCGAGAACTACAGAGACTTTCGTGAAAGTGGTAGTGGTAAGAATTATCACAGATTCAGTAGAAATAATGATTTTTATTATAATGGACATTTTAACAATGATTCTAAAAGGAGATGGAATAAAAATTCACACcataaatataacagaaattatGAAGATCAACGGTCTAAAAGCAGCTCTTCTCACAAGGAAAACTGGAGACAACCTTCCAACGATTGTAATGATGCGGATAAGGAGAGACAGGCAAAAAAGCAAGATCATCAGAATTTAAACCAGTCAGAATTTAAATATGCCGCTTCTCAAAGGGAACGCCTCCAGGAAATGCTGCAGCGCCTTCAACTAGAATGTATGGTCTGCTGCGAGAAGCTCCGTCACACTGACCACGTCTGGTCCTGCAAGCAATGCTACAATATCCTCCACCTAAGCTGCGTGAAGAAGTGGGCGAACACGTCGAAAATGGAGACAGGATGGAGATGTCCCGCCTGTCAGAATAATTACCCCAGCGTTCCTAAAGAATACTACTGTTACTGCGACAAAATGATCAGTCCGAGATACGAGCCCGGCACTTTACCGCACAGTTGCGGTGAATTGTGCGGCCGCAGAGGCAAAGCCTGTGACCACACGTGCGTTCTCCTGTGTCACCCGGGTCCCTGTCCCGATTGCACCGTGCCCACGATGAGGGCGTGCGGATGCGGCCTTACCAAGGCCACCGTGACTTGTTGCGCCGACGTGCCCGTTACCTGTCAGAACGTCTGCGGAAAGATCTTGAATTGCGGCGTGCACACTTGCATCTCGACGTGCCATCCGGGTGAGTGTCGTAAGTGCGGGGAATTCGTCATACAGGAGTGTTATTGCGGCAAGTTGGGTCGGAAAGTGCCCTGCACCGCCGAGGTCCAGGCGGTCGAATCCTTCGCGTGCGAGAACGAATGCGGTAAAGTTCTCGATTGTGGAAATCACACGTGCCAGTTGATTTGTCATTCGGGATCGTGCGCCCCCTGTCCGATATCGCCCCAAGCGGTCACCACTTGTCCTTGTGGTCAGACGAAGCTCACCGTCGAGAGGAAATCGTGCTTCGATCCCGTACCCTGCTGTGATAAGGGAGGTTCCAAACCCCGTCAGTTTAGAGGGCTTGAAGAAAATTTTAGGCGCTATGGTGCTGTTGAAAAGCCGAAGCAAGAACAGCGACGATTTGGGGAAAAAGAATGTTCTCAGTGTGCAGCAGAATCTGGTTATTTCAACTCGAGAGATTGCCAGTAA
- Protein Sequence
- MSNWNSNNYYSNREQLQPNEYYSNNYDANDYVNFSGTTFYNSSFNDNRENFYGYNSNESASNTANQPGPSIKDDLRHIDISRSNLTPTAAEFKPRNISVPLENNVSNGTVRRVQINQYRTKKSSSINSSHENTSSANTKQIKYHEPINTDKIEQKSSRESKGNNFKSKPSSANTEDLRNEESGKYQADRDLSENYRDFRESGSGKNYHRFSRNNDFYYNGHFNNDSKRRWNKNSHHKYNRNYEDQRSKSSSSHKENWRQPSNDCNDADKERQAKKQDHQNLNQSEFKYAASQRERLQEMLQRLQLECMVCCEKLRHTDHVWSCKQCYNILHLSCVKKWANTSKMETGWRCPACQNNYPSVPKEYYCYCDKMISPRYEPGTLPHSCGELCGRRGKACDHTCVLLCHPGPCPDCTVPTMRACGCGLTKATVTCCADVPVTCQNVCGKILNCGVHTCISTCHPGECRKCGEFVIQECYCGKLGRKVPCTAEVQAVESFACENECGKVLDCGNHTCQLICHSGSCAPCPISPQAVTTCPCGQTKLTVERKSCFDPVPCCDKGGSKPRQFRGLEENFRRYGAVEKPKQEQRRFGEKECSQCAAESGYFNSRDCQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -