Asol086787.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- stc_1
- Assembly
- GCA_963170755.1
- Location
- OY720679.1:10157208-10169972[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 1.2e-06 0.073 16.3 15.0 4 19 27 42 20 42 0.87 2 11 0.78 4.6e+04 -2.2 2.2 5 10 71 76 71 76 0.93 3 11 1.4 8e+04 -3.0 11.8 1 11 82 92 82 93 0.92 4 11 0.061 3.6e+03 1.3 1.1 4 10 97 103 96 103 0.91 5 11 9.3e-09 0.00054 23.1 10.8 1 19 109 127 109 127 0.98 6 11 1.6 9.3e+04 -3.2 0.8 5 10 155 160 155 160 0.78 7 11 0.0015 86 6.5 10.0 9 19 173 183 166 183 0.78 8 11 0.14 8e+03 0.2 0.3 6 11 186 191 186 192 0.94 9 11 2.3 1.3e+05 -3.7 0.2 9 11 201 203 201 204 0.79 10 11 2.4e-09 0.00014 25.0 13.5 1 19 219 238 219 242 0.92 11 11 3.2e-06 0.19 15.0 11.7 3 18 249 266 248 267 0.86
Sequence Information
- Coding Sequence
- atgtccccgagcagattcgatcccgagatccCACTGATATGTAATAAAACATTACCGTGCGGACAACCGAGTGACCCACATCGTTGCGAGAACAACTGCCACGAGGGTCCCTGTTCACCGTGTCCATTAACGACAACGGTCAAGTGCCGTTGCGGCTATATGGACAAGGAAATACCCTGCAAGGACCTGACCACCAAGGCCGACGACGCTCGCTGCCAGAAAAAATGCACCAAGATGCGGCTCTGTTGCAAGCACAAGTGCAACCAGATGTGCTGCATAGAGATCGAGCACAAGTGCCCGTTGCCCTGCAATCGGCCGCTCTTCTGTGGCTTGCACCGATGCGAGGAGGACTGTCACAGGGGCCGGTGCGGCACCTGCTGGAGGTCCAGTTTTCAGGAGTTGTACTGCGAATGCGGCGCCAGCGTCATCTATCCGCCCGTTCCTTGTGGCATGAAGCCGCCGAATTGCACCAATCCCTGTTCGCGGCCCAGGAGCTGCGGTCACAATGCCTTTCACAACTGCCACACCGGTCTATGTCCGCCTTGCACTGTCCTCTGCAAGAGATGGTGTCACGGAAAGCACGAACAACGGACTACCATTCTCTGTCATCAGGATGATTTCAGTTGCGGACTGCCATGCGGAAAGGAGATGCCGTGTGGACAGCACAAATGCATCCAAACTTGTCATAGCGGTGCCTGTCAAATACCCTGCACGCAACCTTGCCCGAAAGTCAGGCAGAACTGCGAGCACTCCTGCAATCAGCCGTGCCATGAGGGGGATTGTCCAGACGTGGCTTGCAGGCAGAATGTTCGCGTCACCTGCCAGTGCGGTCTGCGATCGTCGATGAGAGTCTGCATGGATTTGACAGGGGAATACCAGAGCATCACGATGAGCCAGCTGGCGTCGAAAATAGCGGACATACAAAAGGGTCAGGCCATCGATATCACTGACATTGTCAGTAATCAGAAGAAATGCGGAGCGCCCAAAACTTTGGAATGCACGGAAGAGTGTCGGGTGGCCGAGAGGAACAGGCGACTGGCGATCGGTCTGCAAATCCGAAATCCAGATCTGAGCGCCAAACTGACGCCCCGCTACTCGGACTTTATGAGGGCCTGGGCCAAGAAGGACCCCCGTTTCTGTCAGCACGTCCACGACAGACTGACCGAACTCGTGCACAAGGCCAAACAGAGCAAACAGAAGAGCCGCTCGCACTCCTTCGAGACGATGAATCGCGACAAGCGCCAGTTCGTCCACGAGTACTGCCAGATGTTCGGCTGCGACAGCGAGGCGTACGACGCCGAACCCAACCGGAACGTCGTCGCCACCGCCTACCGGGACAAATCCTGGCTGCCCAGCATCAGCCTCCTCGAGCTGATACAGCGCGAGAGCGGCCAGCGAAAAGTGCCCGGTCCCGTGCTGGAAAATAACAAGAACAGCGCGAACGTCACGCGCAGGGACCTGGTGCCATTGAAGCATATGTCGCTGCGATCGATTCGTCCACCGACGCCGCCAGGCGAATGCGTGGACTACTTCGATGATCCACCGCTCTAA
- Protein Sequence
- MSPSRFDPEIPLICNKTLPCGQPSDPHRCENNCHEGPCSPCPLTTTVKCRCGYMDKEIPCKDLTTKADDARCQKKCTKMRLCCKHKCNQMCCIEIEHKCPLPCNRPLFCGLHRCEEDCHRGRCGTCWRSSFQELYCECGASVIYPPVPCGMKPPNCTNPCSRPRSCGHNAFHNCHTGLCPPCTVLCKRWCHGKHEQRTTILCHQDDFSCGLPCGKEMPCGQHKCIQTCHSGACQIPCTQPCPKVRQNCEHSCNQPCHEGDCPDVACRQNVRVTCQCGLRSSMRVCMDLTGEYQSITMSQLASKIADIQKGQAIDITDIVSNQKKCGAPKTLECTEECRVAERNRRLAIGLQIRNPDLSAKLTPRYSDFMRAWAKKDPRFCQHVHDRLTELVHKAKQSKQKSRSHSFETMNRDKRQFVHEYCQMFGCDSEAYDAEPNRNVVATAYRDKSWLPSISLLELIQRESGQRKVPGPVLENNKNSANVTRRDLVPLKHMSLRSIRPPTPPGECVDYFDDPPL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -