Basic Information

Insect: Amphimallon solstitiale
Gene Symbol: -
Assembly: GCA_963170755.1
Location: OY720680.1:47667877-47677985[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.15 49 7.8 1.8 3 21 318 336 317 340 0.90

2 10 3.7e-05 0.012 19.2 1.2 1 23 345 367 345 367 0.97

3 10 0.00079 0.26 15.0 3.0 1 23 373 395 373 395 0.97

4 10 0.0097 3.2 11.5 3.6 3 23 426 447 424 447 0.96

5 10 0.049 16 9.3 0.4 2 23 461 483 461 483 0.97

6 10 0.008 2.6 11.8 0.6 5 23 490 509 487 509 0.91

7 10 0.00032 0.11 16.2 2.5 1 23 515 537 515 537 0.98

8 10 9.3e-06 0.003 21.0 1.8 1 23 542 564 542 564 0.98

9 10 2.7e-06 0.00088 22.7 1.4 1 23 570 592 570 592 0.99

10 10 0.00013 0.041 17.5 0.2 1 23 598 620 598 620 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.15	49	7.8	1.8	3	21	318	336	317	340	0.90
2	10	3.7e-05	0.012	19.2	1.2	1	23	345	367	345	367	0.97
3	10	0.00079	0.26	15.0	3.0	1	23	373	395	373	395	0.97
4	10	0.0097	3.2	11.5	3.6	3	23	426	447	424	447	0.96
5	10	0.049	16	9.3	0.4	2	23	461	483	461	483	0.97
6	10	0.008	2.6	11.8	0.6	5	23	490	509	487	509	0.91
7	10	0.00032	0.11	16.2	2.5	1	23	515	537	515	537	0.98
8	10	9.3e-06	0.003	21.0	1.8	1	23	542	564	542	564	0.98
9	10	2.7e-06	0.00088	22.7	1.4	1	23	570	592	570	592	0.99
10	10	0.00013	0.041	17.5	0.2	1	23	598	620	598	620	0.98

Sequence Information

Coding Sequence: ATGCTTGGTGAGACCGTATATAGTGGTATCCTGTTCCGTGAATTCTGGGACAAGACGAGATTACATGATTTCATCATCAAACATAATCAAACCACAAATTTTAAGTTAGCAGAGGGGCCCAGTTTAAGTCCGTATATTTGTCAGGATTGTATTATTGAATTGCTTCAAGCATATAAGTTTAGAGAGAAGTGTGCGAAATCTCAACAAGCACTCCTCGATTTTAAGGCTGAATTAGATGAacgtaataaaataaatttacgcGACAGTGTAAGACAAATAGAGTTAATTCTTAGAGATCACGATTACGAAAGCACATTGGataaaaaagatattataaatataACTGATCGTGAGGATTTTGCTGAAAATATAGATGATTGTGGCAATCGTTCTGAATTAAAACGTTTGTGTTTACTGAAAGGGGAAATTGATGAAACGGAAGCTCTCAAAGGCGGCGGCGTGACTACAGCAGAAATTGATGAAACGAATGCAAAAACACGAACCTGTGACAGTCAACAAAGTGGTGTTAAAATACAACTTGGCAATTTGGCGGTATTTAATATAAAAACAACAGTTGTGCAATCTGAAATGGACAGAAGCAAAAATGACAGTGCAGATAATTCGCCAAAGCCCAAGGAAAATCAAAGCCTCAACGAGCTTAAGATTGTCCCGCTTTCGTTGCTTTTAAGGCCTGCTATATGTACCATTTTGAATGGAAAAACTTCGAATCAAAGTTcttgtatgttaaaaacagaaaCACCAACGTCGATATCTCAGAAAAAGCCAGATAAAGTCCAAATAATAGAGAAAAAAGACCAGTCATACCTGACGTGCCTGAAGAAGCACAAGAGAAGTCATGATAAACCTAAACCAACTCCTGTGCGTAAACGTAAGAGAATATCAGAGATGGTACcaaaaataaagtataaaaaaattgaaatacccGGTGCTTGTCACGTTTGCAATGAACAGTATAATACTTTAAAAGAGTATAAACAACATTCCCGAGCATTTAAACATTATATTAATCCTCATGTTTGTGAAACTTGCGGAAAAGTATTTCCAGAGCAGAATCTTTTAAACAGACATACGACAAAACACGAAAATCGTAAATCACACATGTGCGAAGCGTGTGGTAAATGTTTTAAACTTCTTCCATCTTTACGCGATCATTTAAAGACGCACGATGGAAAATTGAAGCGATTTGCTTGTCGTTTCGTTTACGAGAGTCATCGTAAGAAACATATGGTAATTCACTCAACAGATTTGATCAACTGCAAATTATGTAATAAAACGTTCAAGGCGGAACACAGGTACTTACAACACATGAAAACCCAACATCCAGGTACCAGTACAGATTGCAATGAGGACGACGAAAGGAAGTGCGATTATTGCGACCTAGTCAGTCAAAATAAACAATCTCAAACAGTGCACCTCAGGATTGCTCACAAAGTTAACATATGTATATATTGTGATCATATATTTAAAACAGTAGATCAATTAAACGAACATATGAAGGATCTTCACGAAAATACCTCCGATTTTACATGTCGTTACTGTGGAAAAACTTACGAAAAAACTTCTATGTTGTATACTCATCTAAGTTCACACAAACCAAAATCTTATCAATGCACTACATGCTTGAAAAAGTTTACTAATTCAACATCTTTGAAAGCCCATATTAACCTTCATACAGGTCATAAGAAGTTCAAATGCGACATCTGTGATAAAGCCTTCGTTCATAATTCAAGTTATATTATACATAAAAGAATACATTCAGGGGAGAGGCCGTATGTTTGTGACATTTGTGGCAAAGGAAGCATTGATACCACCACGTACAAGAATCATATGAAAATTCATATAATGCCTACACACACTGATGAAACACTATAG
Protein Sequence: MLGETVYSGILFREFWDKTRLHDFIIKHNQTTNFKLAEGPSLSPYICQDCIIELLQAYKFREKCAKSQQALLDFKAELDERNKINLRDSVRQIELILRDHDYESTLDKKDIINITDREDFAENIDDCGNRSELKRLCLLKGEIDETEALKGGGVTTAEIDETNAKTRTCDSQQSGVKIQLGNLAVFNIKTTVVQSEMDRSKNDSADNSPKPKENQSLNELKIVPLSLLLRPAICTILNGKTSNQSSCMLKTETPTSISQKKPDKVQIIEKKDQSYLTCLKKHKRSHDKPKPTPVRKRKRISEMVPKIKYKKIEIPGACHVCNEQYNTLKEYKQHSRAFKHYINPHVCETCGKVFPEQNLLNRHTTKHENRKSHMCEACGKCFKLLPSLRDHLKTHDGKLKRFACRFVYESHRKKHMVIHSTDLINCKLCNKTFKAEHRYLQHMKTQHPGTSTDCNEDDERKCDYCDLVSQNKQSQTVHLRIAHKVNICIYCDHIFKTVDQLNEHMKDLHENTSDFTCRYCGKTYEKTSMLYTHLSSHKPKSYQCTTCLKKFTNSTSLKAHINLHTGHKKFKCDICDKAFVHNSSYIIHKRIHSGERPYVCDICGKGSIDTTTYKNHMKIHIMPTHTDETL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -