Basic Information

Insect: Amphimallon solstitiale
Gene Symbol: -
Assembly: GCA_963170755.1
Location: OY720680.1:48434631-48448536[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 5.2 1.7e+03 2.9 0.9 3 19 490 506 488 512 0.90

2 13 0.001 0.33 14.6 0.2 1 23 516 538 516 538 0.95

3 13 0.0015 0.5 14.1 2.9 2 23 545 567 544 567 0.91

4 13 1.3e-05 0.0043 20.5 2.6 1 23 574 596 574 596 0.98

5 13 0.00035 0.12 16.1 1.1 1 23 602 624 602 624 0.97

6 13 0.00085 0.28 14.9 3.2 1 23 630 652 630 652 0.96

7 13 6.6e-06 0.0022 21.5 2.3 1 23 658 681 658 681 0.97

8 13 0.008 2.6 11.8 1.4 3 23 695 716 694 716 0.96

9 13 0.087 29 8.5 3.4 1 23 719 741 719 741 0.95

10 13 1.6e-05 0.0052 20.3 0.7 1 23 748 770 748 770 0.97

11 13 0.00027 0.089 16.4 2.9 1 23 776 798 776 798 0.99

12 13 0.00034 0.11 16.1 4.3 1 23 804 826 804 826 0.98

13 13 0.0082 2.7 11.8 3.7 1 23 832 855 832 855 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	5.2	1.7e+03	2.9	0.9	3	19	490	506	488	512	0.90
2	13	0.001	0.33	14.6	0.2	1	23	516	538	516	538	0.95
3	13	0.0015	0.5	14.1	2.9	2	23	545	567	544	567	0.91
4	13	1.3e-05	0.0043	20.5	2.6	1	23	574	596	574	596	0.98
5	13	0.00035	0.12	16.1	1.1	1	23	602	624	602	624	0.97
6	13	0.00085	0.28	14.9	3.2	1	23	630	652	630	652	0.96
7	13	6.6e-06	0.0022	21.5	2.3	1	23	658	681	658	681	0.97
8	13	0.008	2.6	11.8	1.4	3	23	695	716	694	716	0.96
9	13	0.087	29	8.5	3.4	1	23	719	741	719	741	0.95
10	13	1.6e-05	0.0052	20.3	0.7	1	23	748	770	748	770	0.97
11	13	0.00027	0.089	16.4	2.9	1	23	776	798	776	798	0.99
12	13	0.00034	0.11	16.1	4.3	1	23	804	826	804	826	0.98
13	13	0.0082	2.7	11.8	3.7	1	23	832	855	832	855	0.94

Sequence Information

Coding Sequence: ATGCATTGTGCGGTCGTTGGTTGTACCACACGTAATCAAAATAAAACGTGTAAAAACGAAATATTCTTCCCATTTCCCAAAGATGTAAATATGTGCAAAGCATGGAAGTATGCATGTGGTAGGTCCGATGATTTCAGTACGGAGACTGCGATGATATGCGAGAGACATTTTGAGAAAAGTGACTACGAAAGGACACAGGAATATGATGGTGTTGGATACAAAATACGCCATTTTCTTAAAACGTATGCCTTACCAACAATGAATTTATCTAAGCTGTCGGGAAATGTAAGTGATAATATTGCCGTTAGTGACAGAACTGAGGTTACAGATAGAACCTATTACAATAGAAGCATCACCGATTCATCTGTTGAAAATGTTAATCAGATAAAGGAACCGTGCAATAGGAAATGTGCTGTTTCTTCGTGCATtgcacaaaataattttatactcgaTTTTCCAAATCCCACAAAAAACAGGAAAACTTATCTGGAATGGCTGTCTCTTTGTAAAAATGAAGAGCTTAAAAAGATACCATATGAAAAATTGAACAGTCTATACGGAATATGTGATGCACATTTTGGCAAAAAAACTTTGACTTTACACGATTCAGTGCCTACGTTACAACTCCcagAGCTAGATGGAGAAGTGAAGGAAGAAATATATGAACCAAGTCAGCTATGTAGATTGTGCTTTAACGCTGGCACTATTGATGTTTTTTCCTGCAGATATTACAAGAAAGTGCTTAAGGACATTATCAAGACTTTTGTGCCCATAGAGATTAAGAAAGATGATGTTTCTACGTTAGTTTGTCAGAGTTGTAAGTGTGAAGTAATAAGATTCTATAATTTCTTATTGAAGAGTTTGCAAGTCGACGAATATTTTCAAGCTATAGCTCGGGAGGTTAATAACGAACACGATATTGATTATAATAACTCTGTAGTAGTTTTTGAACCAAACGTGTCATTAGTTAAAGTTAATGAAGAAGAAATGCCTGTAGCAAGCAAGGAAATCGAAACTGTTTTGGTGGATGATCATGATCATGGTGATGATGATGATGTTGATGATGCCGACGGTTCTATTCAACCTGGAATGTCCTTATTAAGAAAATGTTTAACAGCAGGTCAACAGGCAGAAGAACCACCAAAAACGATCCAGACAGAAAGTAAAAACGCCGAAGAAGCGATTATGGTTAGTGACGATGACGACGAAGAAGAAGAAAACAGATATCTAGTGCCTAATTATGTAATGGAATATTTTCATACTTACGTCACAGATCCTAATAAAAAACGTAAATCTGGTCGGCAGAGAAGTATTGATAAACAAATATCTAATGCGAGTTCGGAAAAATTACAGAACTCGTGCACAGATGGTGAAGTTGTCAAAAGTTCAAGTCCTAACAAAAAACGAGCCGACTCTTTGCAAGTTGAAACCACTGAAAATAACGCTGAAAATAGCGACACTATAATATGCGTACATTGCGACAAGGTCATCGAAAGTATAGATCAATTCACTGAACATTGTAAACTCGAGAATCACACTCCCCTGTATGCTTGTAGCGTGTGCAACAAGATGTTCGACAGCCAGACTGATTTGGACGAGCACTTCGAAGTTCATAAGAAGACTGAACACTGCATATGTGATCGCTGTGGAAAACAATTTACCAAAAGAGATAGTTTATACTCCCATATGACTTTCGTTCACAACAAAAACGATTTGAAATATTCGTGTAATCAATGTACCAAGAAATTCGCAACGAATTACAGGTTGAAGTTGCACATGCGAGTCCATAGCAATGATAGGCCATATTGTTGTGAAAAATGCGGAGCCGTATTTACAATGTTGGCCTACCTGAGAAATCATCAGACGATTCACTCTGATTTTAAGCCTCACATATGCTTGATTTGTAATAAAGGATTCCGCAGAAGACACAAACTGGCCATCCATTTGACTATGCACACAGGCGAAAGGAAATATTCCTGCGAAAAGTGTGGAATTTCTTATAAGCGGAAAGTGAATTTAACTAGACATAACAGAAAGTATCACATAAATCCAAACGAAGAAATTGAGCAACGGCCACGAAATTGCTCTCAGTGTGATTTTGTATGTAATTTTCCGGCTCAACTTAAAATGCACATGTTGAAGGTGCATAAATCTTATACATGCACTATTTGCAATATGACTTTTAATAATTATCAGCCGTACTACAATCACAAGTTTAAACACTATCCGAACAAGATGAAATTCGTGTGCAAGTATTGCAACAAGAGATTCATAAATACCACTTTGCTCAATGTTCACATGGTCGTGCATACGGGAAAGAAGAATTTTCAATGTGAACTGTGCATGAAACGGTTTTCCCAAAGACCACATTTACAATCTCACTTATTGACACATACAGGGGAGAAGCCTCATAAATGTAAATTTTGTACGAAAAGTTTTGCGCATTTGTCAACGTTGGTAGTACACGAGAGAATTCATACCGGTGAAACCCCCTACGTTTGTCAATTTTGTAATAAAGGTTTCGGTCATTTGACCAATTATAAGAAGCATGTCTTTTCCCAACATGGCGTCGTTATGCCGAAGACGCGAGATTATTCGTCCTTTAAGAAAGTTCCGGAAGATAACGACGTGGAAAGTAATGATGGTGATCCAGAAGAGTCAGTCGCCGAAATGCCCGCAGAATACATAATAATTAATGAAGAAGAGCTTATTAAATCTGAAGTTTGTGAAATTATATGTGATGATAACAATGTCTTAGAAGAAATAGAAGAAAGTCttgtttga
Protein Sequence: MHCAVVGCTTRNQNKTCKNEIFFPFPKDVNMCKAWKYACGRSDDFSTETAMICERHFEKSDYERTQEYDGVGYKIRHFLKTYALPTMNLSKLSGNVSDNIAVSDRTEVTDRTYYNRSITDSSVENVNQIKEPCNRKCAVSSCIAQNNFILDFPNPTKNRKTYLEWLSLCKNEELKKIPYEKLNSLYGICDAHFGKKTLTLHDSVPTLQLPELDGEVKEEIYEPSQLCRLCFNAGTIDVFSCRYYKKVLKDIIKTFVPIEIKKDDVSTLVCQSCKCEVIRFYNFLLKSLQVDEYFQAIAREVNNEHDIDYNNSVVVFEPNVSLVKVNEEEMPVASKEIETVLVDDHDHGDDDDVDDADGSIQPGMSLLRKCLTAGQQAEEPPKTIQTESKNAEEAIMVSDDDDEEEENRYLVPNYVMEYFHTYVTDPNKKRKSGRQRSIDKQISNASSEKLQNSCTDGEVVKSSSPNKKRADSLQVETTENNAENSDTIICVHCDKVIESIDQFTEHCKLENHTPLYACSVCNKMFDSQTDLDEHFEVHKKTEHCICDRCGKQFTKRDSLYSHMTFVHNKNDLKYSCNQCTKKFATNYRLKLHMRVHSNDRPYCCEKCGAVFTMLAYLRNHQTIHSDFKPHICLICNKGFRRRHKLAIHLTMHTGERKYSCEKCGISYKRKVNLTRHNRKYHINPNEEIEQRPRNCSQCDFVCNFPAQLKMHMLKVHKSYTCTICNMTFNNYQPYYNHKFKHYPNKMKFVCKYCNKRFINTTLLNVHMVVHTGKKNFQCELCMKRFSQRPHLQSHLLTHTGEKPHKCKFCTKSFAHLSTLVVHERIHTGETPYVCQFCNKGFGHLTNYKKHVFSQHGVVMPKTRDYSSFKKVPEDNDVESNDGDPEESVAEMPAEYIIINEEELIKSEVCEIICDDNNVLEEIEESLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00068477;
90% Identity: iTF_00068477;
80% Identity: iTF_00068477;