Asol002272.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Amphimallon solstitiale
Gene Symbol
-
Assembly
GCA_963170755.1
Location
OY720675.1:3323965-3334031[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 43 2.4 7.8e+02 4.0 1.3 1 23 289 312 289 312 0.97
2 43 0.51 1.7e+02 6.1 0.4 2 23 319 340 318 340 0.96
3 43 0.29 96 6.9 8.5 1 23 346 368 346 368 0.98
4 43 0.01 3.3 11.5 3.9 2 23 375 396 374 396 0.97
5 43 1.2 4e+02 4.9 7.4 1 23 402 424 402 424 0.98
6 43 0.039 13 9.6 4.7 1 23 430 452 430 452 0.98
7 43 9.9 3.2e+03 2.1 1.2 1 23 458 480 458 480 0.86
8 43 0.00045 0.15 15.7 0.8 2 23 486 507 485 507 0.97
9 43 0.051 17 9.3 0.5 1 23 513 535 513 535 0.97
10 43 0.0074 2.4 11.9 1.2 1 23 541 563 541 563 0.97
11 43 0.00076 0.25 15.0 1.1 1 23 569 591 569 591 0.97
12 43 0.00012 0.04 17.5 0.7 1 23 597 619 597 619 0.98
13 43 0.36 1.2e+02 6.6 3.3 1 23 625 648 625 648 0.96
14 43 1.4 4.4e+02 4.8 2.0 1 23 654 676 654 676 0.96
15 43 0.017 5.5 10.8 0.7 1 23 726 749 726 749 0.97
16 43 0.25 82 7.1 0.3 2 23 756 777 755 777 0.97
17 43 0.17 56 7.6 8.7 1 23 783 805 783 805 0.99
18 43 0.014 4.7 11.0 4.0 2 23 812 833 811 833 0.97
19 43 0.3 98 6.8 3.2 1 23 839 861 839 861 0.98
20 43 0.096 32 8.4 5.0 1 23 867 889 867 889 0.98
21 43 4.9 1.6e+03 3.0 1.0 1 23 895 917 895 917 0.87
22 43 0.0048 1.6 12.5 0.9 2 23 923 944 922 944 0.95
23 43 0.0014 0.45 14.2 1.3 1 23 950 972 950 972 0.97
24 43 0.035 12 9.8 3.9 1 23 978 1000 978 1000 0.97
25 43 0.0023 0.74 13.5 1.5 1 23 1006 1028 1006 1028 0.96
26 43 0.00026 0.084 16.5 0.2 1 23 1034 1056 1034 1056 0.98
27 43 0.033 11 9.8 2.7 1 23 1062 1085 1062 1085 0.96
28 43 1.4 4.4e+02 4.8 2.0 1 23 1091 1113 1091 1113 0.96
29 43 0.0026 0.86 13.3 0.9 1 23 1158 1181 1158 1181 0.97
30 43 0.12 38 8.1 0.4 2 23 1188 1209 1187 1209 0.97
31 43 0.025 8.3 10.2 2.8 1 23 1215 1237 1215 1237 0.99
32 43 0.02 6.4 10.6 3.2 2 23 1244 1265 1243 1265 0.97
33 43 0.041 14 9.5 5.6 1 23 1271 1293 1271 1294 0.96
34 43 0.047 16 9.4 5.6 1 23 1299 1321 1299 1321 0.98
35 43 2.9 9.5e+02 3.7 0.7 1 23 1327 1349 1327 1349 0.88
36 43 0.11 36 8.2 3.3 2 23 1355 1376 1354 1376 0.95
37 43 0.0011 0.36 14.5 1.9 1 23 1382 1404 1382 1404 0.97
38 43 0.29 94 6.9 6.4 1 23 1410 1432 1410 1432 0.91
39 43 0.34 1.1e+02 6.6 0.6 1 23 1447 1469 1447 1469 0.95
40 43 0.017 5.6 10.8 1.5 1 23 1475 1497 1475 1497 0.94
41 43 0.13 43 8.0 2.6 1 23 1503 1526 1503 1526 0.96
42 43 4.1 1.3e+03 3.3 2.8 1 23 1532 1554 1532 1554 0.97
43 43 0.03 9.7 10.0 3.0 1 22 1560 1581 1560 1581 0.97

Sequence Information

Coding Sequence
ATGGTGCGCAATTATGAACGCAAAAGACCGCCAAATAAGAACTATGACATGGACAGTTTACAACATGCGATGCGACAAGTCCGTACCAAAAGAACGACGATGTATAGAGCTTCAAAAACATTCAAAGTACCTTTCAGTACCCTATACAGCCGTGTAAAAGGTTTACGTGTGGTAAAAAGCACCACCAAAGTTCGAACAACTGCGTTTTCGCAGTTAGAAGAACGTAAGCTAGTATTAGGGCTCACAACACTAGAAAAATGGGGTTTTGGGTTGAGCCGCAAAGACACCTTAATATCAAAACTCCATTCAAAGATAATGCTTAGCTTAAAGGTTCCACAAGCTGTCGAATTTGCGAGGAAAAAAGCAACAGCTCCTGCCAACAAAAAAGAAGGCGATGCTTCTACTACTGCATCTATTTCTACCAATGATGTGGTATCATTTGAGTCTCTTCTACTTTCCACGGTTAAACAAAAGAAACCTTGTGAGAAGTATCCAAAGAAGAGAGTAGCAGCAGGTGCTGAGATTATAAGTCGAGAAATTCTTTGCATGAAGACCGATATTGTTGCATCCTCAAAGAAAAGAAGACAACAAGCAGATAGTTCTTCTGAAGATGATGGGTCAGTAGTTTTGTCATTTCGCGATTCTGACAGTGACAAAGAGTTTCTAGAAAACTTAAGAAATCCGTCTCCAGAAATTAGTGATGTTCAACAGGTTTCAGAATTCGGCAAATGgcAGTGCATATTATTAGCTCCGGAAGAAGAAACACTACTCTCAACTAAATTAAATAGGCAGCCATATGTACAAAAAGAAACTCCCATATTGAGAGCGACTCCTGTGCATAATCAAGATGAAGAAGACAAAAGATTTGAATGTTTTTTGTGCGAACACGTCACGAACGGGAAAACTCGTTTGGACGCTCACTACCGAAGTGATCATTTTATAGATGGAAAACTTAAGTGCCCGCAGTGCGAATATGAGTCTGATCGCAGAACCATTCTGAAACTGCACATGATTAAACATCTAGGCGTTAAACGGTTCAAGTGTTTGCAATGTGATTTCTCAACGCGTTTCAAGCACTGCCTCAGGAGACATTTAAACAACCACGAAACGGTGAAGAGTCTTAAGTGTTCGCAATGTGAGTACACGACAAAAAGCAAGGATTGCCTTCGGAATCATCTTGATACTCATGTGACGGTGAAACGATTTAAATGTACGCAATGTGACTACACAACACATCGCGGATTCCATTTTAAGAACCATTTAGCTAAGCACGACGCGGTAAAGCCATACTCATGTTCAAAATGCGACTTTGTGACGCATTCACAGCGGTATCTTCGAAATCATTTATATACGCACGAGACGGTGCGAAGATTCGAATGCCCCCAATGTGATTACTTGGCGAAATGTAGGAGATCTCTCGCAAAACACGTCTCCTTGCACAAGACGAAAGATTTAAAATGTCCGGTATGCGACTATGTGacaaacaataaatattatttgaaaatgcATTCCAACACTCACGATACTGTGAAACGGTTTAAGTGTTCGGAATGTGACTTCGCTACCACCAGTAAAGAGATTCTCAAATCTCATGTTGCTAGACACACTACCGAGAAATCGTTCAAATGTCCGTTATGCGACTACGTGACGTACGAGAAACGTTATTTGGAACGACATTCTAGTAGCCACGAAGCTGTGAGACGCTTTAAATGTTCAGAATGTGACTACGCGGCAACTAGCAGTCGTAATCTTAGAAAGCATTCCATCAAGCACAACACTGATAAATCGTTTAAATGTGCCGAATGTGATTACGTGACGAATCGTAAAGATTATCTTACACAGCACGTCAAAATACACGCAAGTGTGATGGAATTTAAGTGCACCGAATGCGAGTACGCCACGCACATCAAATCTCGTTTTAAAAGGCATATGCTTGAAACGCACGAGACTGTAAAACGATTTAAATGTTCCCAATGTGCTTATGCGACGAATATTAAGGGTAAACTTACAAGACATTCTCATGTTCATGACGCCGCTAAACCgcAGTGCATATTATTAGCTCCGGAAGAAGAAACACTACTTTCAACTAAATTAAATAGGCAGTCATTTGATCAAAAAAAAACTACGATTTTGAGAGCGGCGACTGTGCATAATCAAGATGAAGGAGACAAGAGATTTGAATGTTTTTTGTGCGAATACGTCACAAACCGCAAAACTCTTTTGGACGCTCACTACCGAAGTGATCATTTTATAGACGGAAAACTTAAGTGCCCGCAATGCGAATATGAGTCTGATCGCAGAGACATTCTTAAACTGCACATGATTAAACATCTAGGCGTTAAACGGTTCAAGTGTTTGCAATGTGATTTCTCAACTCGTTTCAAGCACTGCCTCAGGAGACATTTAAGCACACATGAGACGGTGAAGAGTCTTAAATGTACGCAATGTGAGTATAGAACAAAACGCAAGGATTGCCTTAAGAGTCATCTTTTAGTCCATGAGACGGCGAAGCGATTTAAATGTTCGCAATGTGACTACACAACACATCGCGGAATCGATTTTAAGAACCACTTAGCCAAGCACGACGCAGTGAAGCCATACTCATGTTCAAAATGCGACTTTGTGACGCATTCACAAAGGTATCTTCGAAATCATTTATATAAACACGAGACGGTGCGACGATTCGAATGCCCCCAATGTGATTACATGGCGATATGTAGGCGATCTCTCGCGAAACACGTCTTCTTGCACAAGCCGAAAGATTTAAAGTGTCCGTTATGCGACTACGTGacaaacaataaatattatttgaaaatgcATTCCACCAGTCACGATATTGTGAAACGGTTTAAGTGTTCTGAATGTGACTTCGCTACGAACAGTAAAGAGAATCTCAGATCTCATTTTGCTAGACACACTACCGATAAATCGTTCAAATGTCCGTTATGCGACTACGTGACGTACAAGAAATGTTATTTGGAACGGCATTCTAGTAGTCACGAAGCTGTGAGATGCTTTAAATGTTCAGAATGCGACTACGCGGCAACCACCAGTCGTAATCTTAAAAGTCATTCCACCAAGCACAACACTGATAAATCGTTTAAATGTGCCGAATGTGACTACGTGACGAATCGCAAAGACTATCTTATAATACACGTCAAGATACACGCAAGTGCGATGGAATTCAAGTGTGCCGAATGCGAATACGCCACACACAACAAATCTCGTTTTAAAAGGCATATGCTTGAAATGCACGAGACTGTAAAACGATTTAAATGTTCCCAATGTGCTTATGCGACGAATATTAAGGGCAAACTTACAAGACATTCTCATGTTCATGACGCCATTAAACCgCAGTGCATACTATTAGCTCCGAAAGAAGAAACACTACTTTCAActaaattaaatcaaaaagaaaCTCCGATTTTGAGAGCGGCTACTGTGCATAATCAAGATGAAGAAGACAAGAGATTTGAATGTTTTTTGTGCGAATACGTCACAAACCGCAAAACTCTTTTGAACGCTCACTACCGAAGTGATCATTATATAGACGGAAAACTTAAGTGCCCGCAGTGCGAATATGAGTCTGATCGCAGAGACATTCTTAAACAGCACATGATTAAACATCTAGGCGTTAAACGGTTCAAGTGTTTGCAATGTGATTTCACAACTAATTTCACGCGCGGACTCAGGAGACATTTAAACACACACGAGACGGTGAAGAGTCTTAAATGTACGCAATGTGAGTACACAACAAAGCAAAAGGATTGCCTTAACTATCATCTTTTAGTCCATGAGACGGCGAAGCGATTTAAATGTTCGCAGTGTGACTACACAACACATCGCAAAGACGTTCTTAAGAACCATTTAGCTAAGCACCACGCGGTAAAGCCATACTCATGTTCAAAATGCGACTTTGTGACGCATTCAGAAAGGAATCTTCGAAATCATTTACATACGCACGAGACGGTGCGACGATTCGAATGCCCCCAATGTGATTACGTGGCGATATGTAGGCGATCTCTCGCAAAACACGTCTTCTTGCACAAGCCGAAAGATTTAAAGTGTCCGTTATGCGACTATGTGACGAACAAGAAGTATTGTTTGAAATTACATTTCACCAGTCACGATGCTGTGAAACGGTTTAAGTGTTCCGAATGTGACTTTGCTACGACCAACAAACAGAATCTCAGATCTCATTTTGCTAGGCACACTACCGATAAATCGTTCAAATGTCCGTTATGCGACTACGTGACGTACAGGAAATGTTATTTGGAACGGCATTGTAGTAGTCACGAAGCTGTGAGATGTTCTAGTAGTCATGAAGCTGTGAGGCGCTTTAAATGTTCAGAATGCGACTACGCGGCAACCACCAGTCGTATTCTTAAAAGTCATTCTATCAAGCACAACACTGATAAATCGTTTAAATGTGCCGAATGTGACTACGTGACGAATCGCAAAGACTATCTTGCAATACACTGCAAAATACACGCAAGTGCGATGGAATTTAAGTGTGCCGAATGCGTATACGCCACACACAACAAATCTCGTTTTAAAAGGCATATGCTTGAAATGCACGAGACTGTAAAACGATTTAAATGTTCCCAATGTGCTTATGCGACGAATATTAAGTGCAAACTTACAAGACATTCTCTTGTTCATGACGCCATTAAACCGTTTAAATGTTCGCGATGTGAATTTGAAACCAAATATAAAAGTAGTCTGAAAACACATCAAAAGACATGTATCTAA
Protein Sequence
MVRNYERKRPPNKNYDMDSLQHAMRQVRTKRTTMYRASKTFKVPFSTLYSRVKGLRVVKSTTKVRTTAFSQLEERKLVLGLTTLEKWGFGLSRKDTLISKLHSKIMLSLKVPQAVEFARKKATAPANKKEGDASTTASISTNDVVSFESLLLSTVKQKKPCEKYPKKRVAAGAEIISREILCMKTDIVASSKKRRQQADSSSEDDGSVVLSFRDSDSDKEFLENLRNPSPEISDVQQVSEFGKWQCILLAPEEETLLSTKLNRQPYVQKETPILRATPVHNQDEEDKRFECFLCEHVTNGKTRLDAHYRSDHFIDGKLKCPQCEYESDRRTILKLHMIKHLGVKRFKCLQCDFSTRFKHCLRRHLNNHETVKSLKCSQCEYTTKSKDCLRNHLDTHVTVKRFKCTQCDYTTHRGFHFKNHLAKHDAVKPYSCSKCDFVTHSQRYLRNHLYTHETVRRFECPQCDYLAKCRRSLAKHVSLHKTKDLKCPVCDYVTNNKYYLKMHSNTHDTVKRFKCSECDFATTSKEILKSHVARHTTEKSFKCPLCDYVTYEKRYLERHSSSHEAVRRFKCSECDYAATSSRNLRKHSIKHNTDKSFKCAECDYVTNRKDYLTQHVKIHASVMEFKCTECEYATHIKSRFKRHMLETHETVKRFKCSQCAYATNIKGKLTRHSHVHDAAKPQCILLAPEEETLLSTKLNRQSFDQKKTTILRAATVHNQDEGDKRFECFLCEYVTNRKTLLDAHYRSDHFIDGKLKCPQCEYESDRRDILKLHMIKHLGVKRFKCLQCDFSTRFKHCLRRHLSTHETVKSLKCTQCEYRTKRKDCLKSHLLVHETAKRFKCSQCDYTTHRGIDFKNHLAKHDAVKPYSCSKCDFVTHSQRYLRNHLYKHETVRRFECPQCDYMAICRRSLAKHVFLHKPKDLKCPLCDYVTNNKYYLKMHSTSHDIVKRFKCSECDFATNSKENLRSHFARHTTDKSFKCPLCDYVTYKKCYLERHSSSHEAVRCFKCSECDYAATTSRNLKSHSTKHNTDKSFKCAECDYVTNRKDYLIIHVKIHASAMEFKCAECEYATHNKSRFKRHMLEMHETVKRFKCSQCAYATNIKGKLTRHSHVHDAIKPQCILLAPKEETLLSTKLNQKETPILRAATVHNQDEEDKRFECFLCEYVTNRKTLLNAHYRSDHYIDGKLKCPQCEYESDRRDILKQHMIKHLGVKRFKCLQCDFTTNFTRGLRRHLNTHETVKSLKCTQCEYTTKQKDCLNYHLLVHETAKRFKCSQCDYTTHRKDVLKNHLAKHHAVKPYSCSKCDFVTHSERNLRNHLHTHETVRRFECPQCDYVAICRRSLAKHVFLHKPKDLKCPLCDYVTNKKYCLKLHFTSHDAVKRFKCSECDFATTNKQNLRSHFARHTTDKSFKCPLCDYVTYRKCYLERHCSSHEAVRCSSSHEAVRRFKCSECDYAATTSRILKSHSIKHNTDKSFKCAECDYVTNRKDYLAIHCKIHASAMEFKCAECVYATHNKSRFKRHMLEMHETVKRFKCSQCAYATNIKCKLTRHSLVHDAIKPFKCSRCEFETKYKSSLKTHQKTCI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-