Basic Information

Insect: Amphimallon solstitiale
Gene Symbol: ZNF556
Assembly: GCA_963170755.1
Location: OY720680.1:9321181-9324189[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 5.3e-05 0.017 18.7 0.7 1 23 140 162 140 162 0.95

2 15 0.0021 0.68 13.6 0.9 3 23 170 190 169 190 0.99

3 15 0.00019 0.063 16.9 0.1 1 23 292 314 292 314 0.98

4 15 0.0043 1.4 12.6 0.1 1 23 320 343 320 343 0.97

5 15 2.1e-05 0.0069 19.9 3.8 1 23 367 389 367 389 0.97

6 15 0.041 14 9.5 0.1 1 23 402 424 402 424 0.90

7 15 0.76 2.5e+02 5.6 0.4 1 23 430 453 430 453 0.96

8 15 0.088 29 8.5 4.4 2 23 461 482 461 482 0.90

9 15 4.1e-05 0.014 19.0 4.6 1 23 488 510 488 510 0.98

10 15 0.0057 1.9 12.3 0.2 2 23 516 537 515 537 0.96

11 15 7.8e-06 0.0025 21.3 0.5 1 23 545 567 545 567 0.98

12 15 0.0017 0.54 13.9 0.1 3 23 575 595 573 595 0.97

13 15 0.00023 0.077 16.6 0.3 1 23 601 623 601 624 0.95

14 15 0.068 22 8.9 1.5 1 23 638 660 638 660 0.96

15 15 0.00082 0.27 14.9 0.1 1 20 979 998 979 1001 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	5.3e-05	0.017	18.7	0.7	1	23	140	162	140	162	0.95
2	15	0.0021	0.68	13.6	0.9	3	23	170	190	169	190	0.99
3	15	0.00019	0.063	16.9	0.1	1	23	292	314	292	314	0.98
4	15	0.0043	1.4	12.6	0.1	1	23	320	343	320	343	0.97
5	15	2.1e-05	0.0069	19.9	3.8	1	23	367	389	367	389	0.97
6	15	0.041	14	9.5	0.1	1	23	402	424	402	424	0.90
7	15	0.76	2.5e+02	5.6	0.4	1	23	430	453	430	453	0.96
8	15	0.088	29	8.5	4.4	2	23	461	482	461	482	0.90
9	15	4.1e-05	0.014	19.0	4.6	1	23	488	510	488	510	0.98
10	15	0.0057	1.9	12.3	0.2	2	23	516	537	515	537	0.96
11	15	7.8e-06	0.0025	21.3	0.5	1	23	545	567	545	567	0.98
12	15	0.0017	0.54	13.9	0.1	3	23	575	595	573	595	0.97
13	15	0.00023	0.077	16.6	0.3	1	23	601	623	601	624	0.95
14	15	0.068	22	8.9	1.5	1	23	638	660	638	660	0.96
15	15	0.00082	0.27	14.9	0.1	1	20	979	998	979	1001	0.94

Sequence Information

Coding Sequence: ATGGAGGAGGGATTTACACTAGCATGGGAGGATGCTGTTTCAGTCGTTCAGGAGGAGGAAGTCATTTGTGGCATGGAAGGAGAAACTATTCTTGCAAGTGATACCCCTGAATTTGCTGATGTCTGTGAAGAAGTAGTTGTCCAAGACAATAATGATAATACTGAAGTTGAAGAAGTTACCACTGACAATGTCATGTACCTTACCGACAATAATGTCTTAATCATGCAACAAAATACTGGGAATCCATTTATGGATTGTCAGGTATCTGAAGAAGTAGTTACAGATCAATGGAACGAAAGTTGTCCTGAAATTATTGTGGGTTCTGAAGAACATGTAGGTGATCTAGAGGAACAATCAAATGACGATGTTATTATTCCATTGCCCTTGGATCAAGACCAGTATACAGCAGCACGACCTTATCCATGTGATTTTTGCAGTAGGAGATTTAGAAAGAAAGCTAATTTAATGAATCATATGGTTGCTCATCAAACTGATCGCCCACATGGTTGCAATTTGTGTGGTGTTCGATATATTAGAAAGTGTGATTTAATAAATCACTTGAAGATCCATGCTTATGTTCCAGAAACAGATAACATGGAAGAGGAAACACAAGAAGATTCAGATTATGAAAAGCATAAAAGACCGAAGCCATTTTTAAAAAAGAGAAAGAGAAGCAAGATCAAAGAAGAATATCCAGATTCTCCAGATGGTAAAGCTGCATCCAGTTCACGATCTTATGACTATGTGGATGAAGATATGCGATTGATGGAAGCTATGGAAAATACTGTTAAAGCTGATTATGTGAATTACTTGCCACAAGAAAACCACCCAATAACTGAACCAAGATACCCTATTACTGATCCGAGAAAGCCGTTTGTATGTCAGCATTGTGGCGTGGGATTTGCAAGGGAAAAAGCTCTAGCTTCTCACGCAAGAGTCCATGCAGGTGATAGTCCTTTCGAATGTCAGAAATGTGGTGAAATGTTTTGGGATGCCGCACTTATGAGAGAACATATAAGGATTAAACACGGAGATATAGAAGAGGATTTCGAGGATGAAGATGGGGAATACAGCGAGGAAGATGGTAAATATGGAGAATTTTTCTGTCAAACATGTGGACTATCATTTCACAGGCAGGATCTTTTAAAAAGACATCAGAGGATTCACGTGAAAGAAGAATATGTAACTGAATCGGAATTTAATCATGTCTGTAAGATATGCGGTGAATCATTTCAGGAAGCTTTGGACATGCTTGCGCATGCAGAGGTGCATGCCAGAGGTTCTGAACATCGATGCATGGCTTGCGGTGAGGTCTGTGCTGACGAACAGTCAGTTGCTGTTCATGTTCAGACAAAACATGGGAAGAGCTTACCCCCCAACACATGCATGCAGTGCGGAAGAACATGTAAAGATAAAAAAACTCTACTGAAGCATTCATTCGAACACACAAAAGAGAAGGTCTTTTCTTGTACTAAATGTCCGAAGACTTTTCATAATAAAGCTAGACTAAAACGCCACATGCTATCGCACAGGAACAAAGTAGTAGTTTGCGATGTGTGTGGTGAAGAGTTTCCTGATGGCCGTTCCTTAATGAACCATCGACATAGCCATAGTAGTGTCTCAGGTAGACAGTTTCCCTGTAAGGAGTGCGGTAAAACTTTCGGCTCCAGGAGCTCGCAGCAGATTCATTTAAGAATACATACTGGAGAACGACCATATGGGTGTAGATATTGCTGGAAAGCTTTTGCTGATGGTGGAACATTACGCAAACATGAACGTATTCATACTGGTGAGAAACCGTATGCTTGTGCTGTATGCCCCAGAGCCTTCAATCAAAGAGTTGTGCTACGCGAGCACATTCGTTCTCACCATTCCGGACCAGATCCGAATTATACTCACAGCATGACTCCTTATTGTTGCTCAGTCTGCTCGGATATGTTCGCCACATCGCAAGATTTAATCGTGCATTTGATACACCACTGTGATCTAAATACAGCAATGAGAAGACAACCTCAAGTTGGTCCGAGAAAATACAAGAGAAGGCGTAAGTTGAAGCCGCACGAGCTGGAGCTCATTTCGACGAACatagaagaagaagaggaggaagaGGAAAACGACGAAGAGGATGAGTATAGTGATTCCGACGATGAGAATGACAGACGCAAAAAGAAGAAAAGACAAGCAAAACAATCGCCAAAACAGAACGTAACCGGATTCACAGATATATACAACAGCTTTTCTTCTACTATAGAAAATTTAAATTGCATCGTGAAAAACAATACTAAAACTAAAAAGAAGACGAAACAAGAGAGCGTAGTTCCATCTAGACCTAAGATGATTCATACTCAGAAGACAAAAGTGGCTGTTGAAACAACAGAAGGTGGAAGAGTACGGCACAAGACTAAAACATTAGTTACGAGAACTCAGCCAATGGAATTGAAATCTGCAACGAGCGAACGCATCAGGCCACGTACAAAGAACGTGAGTTATCATATATTAAATCCTGAAAAATTTCCGTTGGCCACATTTCCTGAGGATGACACTACTCAAGCGGTCAACAATTTATTAGCAAGCGAAACCCAACATGAACAAAGCAACGGCTTAAATCACTCCAGTATGACCGACGGGAATAGTTTTTGCGAACAAGATCAACAAAACAATTCACTCGAAGATGCGAAGCCTGCGAAAAAGACCAACAATAGTTTAGAACCTGGAAGGATAATTATCGGACCAGGTGCGAAAGTGGTGCGAATAGTTAAAAGTGGTATGATTATATCTAAAAATAAGAAAAGAGATGAACCAGAGCCCGAACCTGAACCAGAACAGATCATTCCGGACCTTGACGAACCAGTTGTTCATATAAAACAAGAAGTTGTTGATTCGAGCCCATTGCATGAACTGGCTGAAATATCGATGCAGCATGCTCAAAGTATCTTCAAATGTGAAATGTGTAGTGAGGTATTCACTGATCGAGCACAATTACTAGTTCATGTGCCAATTCACATTTGA
Protein Sequence: MEEGFTLAWEDAVSVVQEEEVICGMEGETILASDTPEFADVCEEVVVQDNNDNTEVEEVTTDNVMYLTDNNVLIMQQNTGNPFMDCQVSEEVVTDQWNESCPEIIVGSEEHVGDLEEQSNDDVIIPLPLDQDQYTAARPYPCDFCSRRFRKKANLMNHMVAHQTDRPHGCNLCGVRYIRKCDLINHLKIHAYVPETDNMEEETQEDSDYEKHKRPKPFLKKRKRSKIKEEYPDSPDGKAASSSRSYDYVDEDMRLMEAMENTVKADYVNYLPQENHPITEPRYPITDPRKPFVCQHCGVGFAREKALASHARVHAGDSPFECQKCGEMFWDAALMREHIRIKHGDIEEDFEDEDGEYSEEDGKYGEFFCQTCGLSFHRQDLLKRHQRIHVKEEYVTESEFNHVCKICGESFQEALDMLAHAEVHARGSEHRCMACGEVCADEQSVAVHVQTKHGKSLPPNTCMQCGRTCKDKKTLLKHSFEHTKEKVFSCTKCPKTFHNKARLKRHMLSHRNKVVVCDVCGEEFPDGRSLMNHRHSHSSVSGRQFPCKECGKTFGSRSSQQIHLRIHTGERPYGCRYCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHIRSHHSGPDPNYTHSMTPYCCSVCSDMFATSQDLIVHLIHHCDLNTAMRRQPQVGPRKYKRRRKLKPHELELISTNIEEEEEEEENDEEDEYSDSDDENDRRKKKKRQAKQSPKQNVTGFTDIYNSFSSTIENLNCIVKNNTKTKKKTKQESVVPSRPKMIHTQKTKVAVETTEGGRVRHKTKTLVTRTQPMELKSATSERIRPRTKNVSYHILNPEKFPLATFPEDDTTQAVNNLLASETQHEQSNGLNHSSMTDGNSFCEQDQQNNSLEDAKPAKKTNNSLEPGRIIIGPGAKVVRIVKSGMIISKNKKRDEPEPEPEPEQIIPDLDEPVVHIKQEVVDSSPLHELAEISMQHAQSIFKCEMCSEVFTDRAQLLVHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00990038;
90% Identity: iTF_00434331;
80% Identity: -