Basic Information

Insect: Amphimallon solstitiale
Gene Symbol: -
Assembly: GCA_963170755.1
Location: OY720679.1:116383761-116399145[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 4.5e-05 0.015 18.9 3.2 2 23 196 217 195 217 0.98

2 11 3.4e-06 0.0011 22.4 1.2 1 23 223 245 223 245 0.99

3 11 0.00052 0.17 15.5 6.1 1 23 253 275 253 275 0.97

4 11 0.00085 0.28 14.9 1.5 1 23 281 303 281 303 0.98

5 11 0.011 3.7 11.3 0.2 1 23 315 337 315 337 0.96

6 11 6.8e-07 0.00022 24.6 2.3 1 23 343 365 343 365 0.96

7 11 2.8e-05 0.0092 19.5 0.5 1 23 371 393 371 393 0.99

8 11 3.2e-06 0.001 22.5 0.6 1 23 399 421 399 421 0.97

9 11 9.9e-05 0.032 17.8 1.5 2 23 428 449 427 449 0.97

10 11 2.4e-05 0.008 19.7 0.1 1 23 455 477 455 477 0.99

11 11 1e-07 3.4e-05 27.2 0.5 1 23 483 505 483 505 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	4.5e-05	0.015	18.9	3.2	2	23	196	217	195	217	0.98
2	11	3.4e-06	0.0011	22.4	1.2	1	23	223	245	223	245	0.99
3	11	0.00052	0.17	15.5	6.1	1	23	253	275	253	275	0.97
4	11	0.00085	0.28	14.9	1.5	1	23	281	303	281	303	0.98
5	11	0.011	3.7	11.3	0.2	1	23	315	337	315	337	0.96
6	11	6.8e-07	0.00022	24.6	2.3	1	23	343	365	343	365	0.96
7	11	2.8e-05	0.0092	19.5	0.5	1	23	371	393	371	393	0.99
8	11	3.2e-06	0.001	22.5	0.6	1	23	399	421	399	421	0.97
9	11	9.9e-05	0.032	17.8	1.5	2	23	428	449	427	449	0.97
10	11	2.4e-05	0.008	19.7	0.1	1	23	455	477	455	477	0.99
11	11	1e-07	3.4e-05	27.2	0.5	1	23	483	505	483	505	0.98

Sequence Information

Coding Sequence: ATGGATCTTAAAAACGAATCTGACcaatttaacataaataaaatatgtcgAGCTTGTTTAACAGAAAAGGAAGAAATGCGCTCCATTTTCTTATCTGATGAATCCATTGGTCAAGCGATGCAACTAGCCGATATGATAATGGGATTTTCTACAGTACAgATACAAAGTAACGACGGGCTTCCTGTACTATTATGTGTACAATGCACAAATGAAGTAATACGAGCATTTTCCTTCAAGCAACTATGTGAACAATCAGATACAAACTTAAGACAGTTTCTTGGTAAACCTCTGATAACAAAGCAAACCAAACAAGATGAAGAGAATCAATCGGCTGATTATTATGCAAGTGCTCTTCTCCTAGATAATTTTGGTTTAGATGATTCTTCAAATGATAGCGATGATTCCTATAAAGAGGATTTTAGTATACTTGATACAACCATTGATCCTGGTGATGAGAAAGCTATTGCCCAAAGACAGCTTTTAAAAGCAGCAAAgatacaaaaatgtaaattatcaaaaaagaaattaCTGGCAAAAAGTGGTAAAACtgTCATAGGATCAAAAAAACATAAGCGTAACTCAAATCAATGTAATGTATGCAAAAAGCAATTTATTAATCTTAAATCTTTTCGTAAACATCTTCGAACACATATTGAAGATCGTCCATACAAATGCAAATTATGTCCTAGAGGTTTCACAGAAGAAAATTATCTGAACAATCATATGAGAACACATATACCAGATGATCAAAAACCTCATGAATGTAAGATATGTAAGAAACGATTCATACACACAACACTGCTAACTAAGCATTTATTAAAACACAGTGGTGAAAAGccatttgtttgtaaaatttgCAATAAGGGGTGTTATGCAGAAAACAGTTTACTAAAACATATGAAAATACATGAAAAGAAAGAAGGTGATCCAGCATTACTGAAACATATATGTGATTACTGCAAAAGTGAATTTCCTGATGCTGCAACTTTAGACATTCATATTAAACAGCATACAGGCGATAGACCATTTCTGTGTAATATCTGTGGAAAATGTTTTCCACAAAGATTTAATTTAGAGTTACATTTACGCACACACACAGGTGAAAGACCATTTACTTGTGAAGTATGTAAGAATGGTTATGTATCCAAAGCTAGTTTGAAAATACATATGCGGACACACACTAATGAAAGACCATTTGCTTGTGAGTTCTGTGGTAAAGCATTTAGGCAGTCAGGTGACCTTACCAGTCATAAACGACTGCATGGAACTGAGAAACCAATTGAGTGTTCTGTTTGTCAGAAAagATTTACTACAGTGATGAAACTAAAATATCACATGAGAAATCACACCGGAGAGCGACCTTATGTTTGTAATATCTGCGGCAGAGGATTTACAGTTAACACTATCTTATTGCGTCATATGCGTGTCCATTCTGGAGAACGACCCTACGTTTGTGTCACCTGCGGAAAGGCGTTTTCACAGTCAAGTACTTTGAATACACACATGAAGGTTCACGCTCCATCACCAAAGTACAACACACAAGAAACCCAACGAATATCtaaatacaataatacaaatgATCAAAAGTATCATCAATCAAATGATCCAAACAACAGACTGATGCAGCATCAATCTTCCCAATCTCAGCAGCAACAGCAGCAAACCTCTGACAACAGGATGATGCAACAAGACTCTGCAAGAATGATGCAGCCTGACAATACCAGAATGCTGGCCAATGATGGATCTCGTATATTAAATGATGCTACTCATTTATTGACTGACAATCGAGGTTTGCTCAATGACGGTAACAGATTACTTGCAAATGATGGCTCTAGGTTACTAGTGAACGTTAGTGAACCTCCCAGACTGTTAGTAAATGATAATACACGTCTTCTAAATGACAATAGAATGTTGACGAACGATAACAATCGGATGTTGGCGACTGTGAATGATGCGACGCGCTTGTTAACTAATGATAATGTTAGACATTTAGCGGTTATTGAAAATTCTAGACTTCTAACAGATAAATATTTATCTAATTATGATCCTTATCATCGGGgtcatttgtaa
Protein Sequence: MDLKNESDQFNINKICRACLTEKEEMRSIFLSDESIGQAMQLADMIMGFSTVQIQSNDGLPVLLCVQCTNEVIRAFSFKQLCEQSDTNLRQFLGKPLITKQTKQDEENQSADYYASALLLDNFGLDDSSNDSDDSYKEDFSILDTTIDPGDEKAIAQRQLLKAAKIQKCKLSKKKLLAKSGKTVIGSKKHKRNSNQCNVCKKQFINLKSFRKHLRTHIEDRPYKCKLCPRGFTEENYLNNHMRTHIPDDQKPHECKICKKRFIHTTLLTKHLLKHSGEKPFVCKICNKGCYAENSLLKHMKIHEKKEGDPALLKHICDYCKSEFPDAATLDIHIKQHTGDRPFLCNICGKCFPQRFNLELHLRTHTGERPFTCEVCKNGYVSKASLKIHMRTHTNERPFACEFCGKAFRQSGDLTSHKRLHGTEKPIECSVCQKRFTTVMKLKYHMRNHTGERPYVCNICGRGFTVNTILLRHMRVHSGERPYVCVTCGKAFSQSSTLNTHMKVHAPSPKYNTQETQRISKYNNTNDQKYHQSNDPNNRLMQHQSSQSQQQQQQTSDNRMMQQDSARMMQPDNTRMLANDGSRILNDATHLLTDNRGLLNDGNRLLANDGSRLLVNVSEPPRLLVNDNTRLLNDNRMLTNDNNRMLATVNDATRLLTNDNVRHLAVIENSRLLTDKYLSNYDPYHRGHL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00741130;
90% Identity: iTF_00434327;
80% Identity: -