Asol101888.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Amphimallon solstitiale
Gene Symbol
ZNF236
Assembly
GCA_963170755.1
Location
OY720680.1:25021149-25039371[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.0001 0.034 17.7 4.8 1 23 46 68 46 68 0.98
2 16 2.8e-06 0.00092 22.7 0.9 1 23 74 96 74 96 0.96
3 16 0.0011 0.36 14.5 0.6 1 23 102 125 102 125 0.97
4 16 0.0037 1.2 12.8 1.8 1 23 135 158 135 158 0.97
5 16 1.6e-06 0.00054 23.4 0.5 1 23 240 262 240 262 0.98
6 16 0.00011 0.036 17.7 1.3 1 23 268 290 268 290 0.99
7 16 0.00044 0.14 15.8 1.8 1 23 296 318 296 318 0.99
8 16 0.0054 1.8 12.3 0.7 1 23 329 351 329 351 0.98
9 16 0.0026 0.86 13.3 3.1 1 23 408 430 408 430 0.99
10 16 0.0021 0.69 13.6 1.3 1 23 436 458 436 458 0.98
11 16 0.042 14 9.5 1.9 1 23 464 486 464 486 0.96
12 16 0.033 11 9.9 2.8 1 23 492 514 492 514 0.98
13 16 0.00085 0.28 14.9 0.5 1 21 849 869 849 870 0.94
14 16 2e-07 6.4e-05 26.3 1.0 2 23 961 982 961 982 0.97
15 16 1.9e-06 0.00061 23.2 3.0 1 23 988 1010 988 1010 0.98
16 16 0.031 10 10.0 1.8 1 23 1017 1039 1017 1039 0.98

Sequence Information

Coding Sequence
ATGCTTTCTTGTGTGAACTTGAATGAGAGATCTGAGCTTGGCTGCACTAATACTGATTGGGAATATCACATAAAGAAATTGGTATATAATCCTAAAAGAACACGAAAGCGTGCCCCAAATAATAAAGAATACAATCATAGGTGCTCAGTTTGTAGTAAATCATTTCCCAAAAATTGCTTGCTACTACGGCATATGAGAATCCACAACGGTGAAAAGCCATTCGCATGTACGAAGTGCGACAAAGCTTTTTCACAAAAGAGTACTTTACAAATTCATCTGGTAAAACATTCAGGACATAAACCGTTTAAATGTACCCTATGCCCTGCCGAATATTTTCAAAAAGGCAACTTACGAGTTCATGTTCAAAAAACTCACACGGCACCACCAAACATTGATAAAATGTACAAATGTACTCAGTGTACTtgtatatttagaaaaattgctTCTCTCAACGCACACATAACCAAAGCTCATGGTATCATGAAAAATATTGATGAACTTACTGACATGAATGAGAAAGTAAAAGCCATCAAGAAAATATGTGATCAGCTTGCGAAAGGCAATGAGAAGATTGGAGAAAACGCATCAAAAAGCACGGAAGATTTATTGGGGTCCGTGGAGCCGAATGAAACCTTTGTTAAATTAGCCGAGAACAGTGTAGATGGTACTCTTCGGAGATATGTTGTTAAACAGAAACGGGTTGGAGATACAAAGTGGTTTATTTGTTTGTATTGTAGTAAAGAATTCAAAAAGCCGTCAGATCTTATTAGGCATATAAGAATACATACAAGAGAGAAACCGTACAAGTGTAAAACATGTAATCAAGGTTTTGCTTTAAAATCAACATTGCTATCACATTTAAATACACATGATGGGAAAAGAGAATTTCAATGTTTAATATGCCTTAAATTTTTCACTTCAGCCCGAACGTTAAGTGTACATACAAGAAAACACAACAAGTCGGGCTCAACTACCAGTTTAAAGTATAAATGTTCTACATGTACTAAATTGTTCAGCACAATTGCGAAAGTGAGAGAACACATGGATATTCACAATTGCGGTAATGCCGACAACATCGAGAAGAACGTAATTGAGGAGGAATATGAGGCACAGGCTCCTTTGAAGCAGCCGATGTTAGAAACCGAAAAAGGTTTGGTAACTGTACCTGCACCGAAACCTCGAATACCATATGGCGAATTAGAGGAATATAAGAATAGACCATATAGATGTCATATATGCAACGCTGCATTTCTGAAACCGACACATGTAAGGAGACATATGTTAACGCATTCAGGggagaaaaattttaaatgtgATCTTTGTTCTAAAGCATTTTTAACATCTTATGGGTTAAAAGATCACCTACGTTTTCATACTTCGGAGAAAAAATTTGCCTGTTCAGTCTGTTCTCAAAAGTTTCTTACCAAAGAGTTCTTGAAACGTCATCAAGTTAAGCATTCACCATTAAGGCCATATATATGCCCATATTGCAAAAGAAGATCTAAAACAGCAGCATTGTGCAGGAAGCATATAACAACTCATAGAAGTGACAGTCATTTAATTAACTCTCATACTGAAATGGAATCGAATCCTACCAAGACTATTGATTTGGTGGACATATCAAATAATCCATTTGATTTAGTAACAGTCGACGAAGAAAGcatattttttaattctaataataatgatttacaaTTTGTGGAAAATCCAGTGTCCACCTTACCTACAGCTCCAGTAAAGAACAAATCGAAGAACAAATCAAGATCTAGGAAAGCGAAACATAAATCTGACAGTAAAAAGCCGGCTGCAAATGCATCGGACTACGATTACGATGTTCTAAATCTACCAAGTAATGCGCAAATATTTATATCTAGAGAAGGCCACTATAGTATTATTATGTCTGACACGTGCGAAATGGAAACAGCTTCTGTTAATTCAAATATTGGAGAGATTGATCAAGAACCGGGAACTATTATTAGTTATGATGAGTATCAATCAGCCAATAACGacgtatataataatttattatccaATGTTAAACTGCAGAATAACGACCCCATACTTGTGAGTACAATAGGGGAATCTCAAGATTCGAATATACTTTTTATGGATCCCACACTAACGCAGAATTCGGAATTTCAAAATGATGCGCAAAATTTTGAACCGTTCAATCCGACAATATTCCATTCCAATGTCGAATTAAACCTCGGCTCGCAAACCTCCATTGCGAATGgggaaattattcaaaatgatcAGGCAGTATTAGCTTCTTCCAAGAAGGATGCGAAATCTTCGCAGCTGATATTAAATTTTTCTGAAGACGGAAATATGCAAAGTGGCAGCAATAAGAAATCTAATAGTATTATCGATAGTTCTAAGTTACTTCTGGCATCTGACAATATAAACTTAAATGACAATCTGATTATAACGTTAAATGGTGATGACTTTTccaatatgaattttaatttaaatatgcaTCCTGGTTTAAATCCCGCCGTGGATAATTTAGCGTTAAATATTATGGATAACGAAGTACAGGGCACGTTCGCCTGTACAATTTGTAAGATTTCTTTCAGTAATATACAGGATTTGGAAAAACATCAGTGCATTGAGCCTATTGCTACTGAATTACATGAGGTAGATGATGACGAAAGTTTGAATCAAATGGATGCTAATAAAGATATACGTGATATTAAACATGAAGGAGAGATTACTCTAATCACAGattacaacgatcagCTCGATACAACCCACGTGGAAATTTCAACGGACGAACTCAGCAGGGATTCcgtaatagaaaaaaatcaaggaAAGGATGATAATAAGTCTGACAAACGTACTAATATCTCGAGGCTTCTCGTACCGAAGAACTTTGAAAATGTCTGCAATTACTGCAGTAAATCATTTAAGAAAGCTTCTGATTTGATACGCCATATAAGAACACATACAGGCGAAAGACCATTTGATTGTAATAAATGTAACAAGAGCTTTTCACTGAAGTCCACTTTGCAATCCCATTTAAGAACACACAGTGACACGAGGAACAAATATGTTTGTCAAGTTTGTAATTCCAACTACAGTTGTCGTGCAACATTGAAGATTCATATGCGAATTCATACAGGTATGTTTGTCTGTACTATGTTAGGAGCCTTCTTTGAGCCTATTTAA
Protein Sequence
MLSCVNLNERSELGCTNTDWEYHIKKLVYNPKRTRKRAPNNKEYNHRCSVCSKSFPKNCLLLRHMRIHNGEKPFACTKCDKAFSQKSTLQIHLVKHSGHKPFKCTLCPAEYFQKGNLRVHVQKTHTAPPNIDKMYKCTQCTCIFRKIASLNAHITKAHGIMKNIDELTDMNEKVKAIKKICDQLAKGNEKIGENASKSTEDLLGSVEPNETFVKLAENSVDGTLRRYVVKQKRVGDTKWFICLYCSKEFKKPSDLIRHIRIHTREKPYKCKTCNQGFALKSTLLSHLNTHDGKREFQCLICLKFFTSARTLSVHTRKHNKSGSTTSLKYKCSTCTKLFSTIAKVREHMDIHNCGNADNIEKNVIEEEYEAQAPLKQPMLETEKGLVTVPAPKPRIPYGELEEYKNRPYRCHICNAAFLKPTHVRRHMLTHSGEKNFKCDLCSKAFLTSYGLKDHLRFHTSEKKFACSVCSQKFLTKEFLKRHQVKHSPLRPYICPYCKRRSKTAALCRKHITTHRSDSHLINSHTEMESNPTKTIDLVDISNNPFDLVTVDEESIFFNSNNNDLQFVENPVSTLPTAPVKNKSKNKSRSRKAKHKSDSKKPAANASDYDYDVLNLPSNAQIFISREGHYSIIMSDTCEMETASVNSNIGEIDQEPGTIISYDEYQSANNDVYNNLLSNVKLQNNDPILVSTIGESQDSNILFMDPTLTQNSEFQNDAQNFEPFNPTIFHSNVELNLGSQTSIANGEIIQNDQAVLASSKKDAKSSQLILNFSEDGNMQSGSNKKSNSIIDSSKLLLASDNINLNDNLIITLNGDDFSNMNFNLNMHPGLNPAVDNLALNIMDNEVQGTFACTICKISFSNIQDLEKHQCIEPIATELHEVDDDESLNQMDANKDIRDIKHEGEITLITDYNDQLDTTHVEISTDELSRDSVIEKNQGKDDNKSDKRTNISRLLVPKNFENVCNYCSKSFKKASDLIRHIRTHTGERPFDCNKCNKSFSLKSTLQSHLRTHSDTRNKYVCQVCNSNYSCRATLKIHMRIHTGMFVCTMLGAFFEPI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00070605;
90% Identity
iTF_00070605;
80% Identity
-