Basic Information

Insect: Amphimallon solstitiale
Gene Symbol: -
Assembly: GCA_963170755.1
Location: OY720678.1:148361446-148364884[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1.7e-05 0.0057 20.2 1.6 1 23 280 302 280 302 0.97

2 12 4.7e-05 0.015 18.8 6.5 1 23 308 330 308 330 0.98

3 12 1.3e-05 0.0042 20.6 1.0 1 23 336 358 336 358 0.99

4 12 0.034 11 9.8 3.0 1 23 364 386 364 386 0.97

5 12 4.1e-06 0.0013 22.1 1.4 1 23 392 414 392 414 0.98

6 12 3.5e-08 1.2e-05 28.6 3.4 1 23 420 442 420 442 0.99

7 12 0.0002 0.065 16.9 4.6 3 23 449 469 447 469 0.96

8 12 1.7e-06 0.00055 23.4 2.3 1 23 475 497 475 497 0.99

9 12 1.2e-05 0.0039 20.7 1.8 1 23 502 524 502 524 0.99

10 12 5.5e-06 0.0018 21.7 4.7 2 23 531 552 530 552 0.98

11 12 3.5e-05 0.011 19.2 3.5 1 23 558 580 558 580 0.99

12 12 3.7e-05 0.012 19.1 4.7 1 23 586 608 586 608 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1.7e-05	0.0057	20.2	1.6	1	23	280	302	280	302	0.97
2	12	4.7e-05	0.015	18.8	6.5	1	23	308	330	308	330	0.98
3	12	1.3e-05	0.0042	20.6	1.0	1	23	336	358	336	358	0.99
4	12	0.034	11	9.8	3.0	1	23	364	386	364	386	0.97
5	12	4.1e-06	0.0013	22.1	1.4	1	23	392	414	392	414	0.98
6	12	3.5e-08	1.2e-05	28.6	3.4	1	23	420	442	420	442	0.99
7	12	0.0002	0.065	16.9	4.6	3	23	449	469	447	469	0.96
8	12	1.7e-06	0.00055	23.4	2.3	1	23	475	497	475	497	0.99
9	12	1.2e-05	0.0039	20.7	1.8	1	23	502	524	502	524	0.99
10	12	5.5e-06	0.0018	21.7	4.7	2	23	531	552	530	552	0.98
11	12	3.5e-05	0.011	19.2	3.5	1	23	558	580	558	580	0.99
12	12	3.7e-05	0.012	19.1	4.7	1	23	586	608	586	608	0.97

Sequence Information

Coding Sequence: atggaaaatatatttcaTGTGGCTGACTACTGTACAGCCTGTTTAAGAATTGAATGTTCCTTAACACCTATCAGCGCTTTAGATAATGATTCTATAAAGTTCTGTGACAAATTGGTTGCTTGTCTATCAGAAGTAATGTGGCTAAAAGAGGGTCTTCCTTCTCTAATTTGCTCGGCGTGCATCGACAAGTTAAGGGTTACTTATGAGTTTCGAAAAGTTTGCTTGCAATCAGACCATATGTTACAGAGGTTTATTAGTCGCCTGCAAGAGGAGGCGAAGCAGCAAAATCTTACTGGCAGTCTCTTAACATCACCAACAAAATTCGAATGCAGCATTACCCAGGTGACACAAGAAGGCTCACCTTGTGTCATTGAAGAACCGCAGAATAcaaagtttttatatttaaagcaTTACCTAGATAACGATGAAGCACTGTTAAAGTCTGAACAGATTGCTGACACACAGGTATCAAGAACCATCACGACCAATCAATATAATGCTTCTAACTTTATAAGACAAGATCATCATGTACAGCCTATAGTGCAGGAGATTGATACACAAGTTCAGGAGagtTACATTCAAGAGAACGATCAGTCGCCGCAATGTAAGCAAGAGGTGCTGTCCCTGGAAGAACAGTCGCAGACGCTACAAGCAGCGCGGCAGCAGCAAGAATACCACCAATCCCAAATAAAACAAGAATCGCTTCAAGAACAACAGCAGACGCAGTCCACTCTTCAACAATTCCCAACACATCAAGTGAACGAAAGGACGACCGATGATCAAATTCGACCTCCCAATCCGAAGTCAGCCAAACATTACGCTCCGGATTTGAAACCATTCGCGTGCAGCATCTGCAACAAGCACTATGGGAGGAAAGGCAGCTTGCGCATCCACGTCCGAACGCATACCGGTGAAAAGCCTTTCGAGTGTAGTTATTGCGAAAGACGTTTTTATCATTCGAGTCATTTATACGAACACATCCGAAGACACACGGGGGAAAAACCGTTTCAATGTGCACTCTGCAATAAGCGTTTCACGATAAAAGGTGAATTGACTATGCACATGAAGTCCCACACCGGGGAAAAACCTTATCCTTGCACGTGCTGTGATCGTCGGTGTTTGACTGCCGCGGATCTGAAGGTGCACATGCGGACTCACACCGGGGAAAAACCGTTCAGCTGTGTTACTTGCGGGAAAAAATTCGCGACCACTTACAGCTTAAATTCACACATCAAGACTCACACGGGTGAACGCCCCTATTCCTGCACGGTATGCGACAAGATGTTCACGCAATCTTCGCATCTCAACATACACATGCGCAAACACACCGGCAAGAAGGTATGCTGTAAGCTTTGCGACGCCAAGTTTACGCATACGTCCCAGTTGACCGTTCACATACGCAAGCATACCGGGAAGCAGCCGTACAAATGTACCGTTTGCGATAAGGTGTGCAATTACGCGTCCGAACTGCAAACGCACATGATGAAACATACCGGTGAGAAGTTCACTTGCGTCACCTGCGATAAGAAGTTTCAGTCGGCGTCGTACCTGCAGGAGCACACACGGACTCATACCGGTGAGAATTTGTCGACCTGCACAGTCTGTAATAAACAGTTCACCAGGCATCAGTACCTGGAGAAGCATATGCGAACCCATACCGGTGAAAAACCGTACAGGTGTTTCACTTGCGGTAAGAAGTTCACGCAAGGGTGTTCCTTGAAGGTGCACATCCGTATTCACACGGGTGAGAGGCCGTATTGTTGTACTATATGTGATCGAAGGTTCACGACATCTTCTGATTTGTCGACGCACAGCAAGAGACACAAAAAGTACATAAATCTgtaa
Protein Sequence: MENIFHVADYCTACLRIECSLTPISALDNDSIKFCDKLVACLSEVMWLKEGLPSLICSACIDKLRVTYEFRKVCLQSDHMLQRFISRLQEEAKQQNLTGSLLTSPTKFECSITQVTQEGSPCVIEEPQNTKFLYLKHYLDNDEALLKSEQIADTQVSRTITTNQYNASNFIRQDHHVQPIVQEIDTQVQESYIQENDQSPQCKQEVLSLEEQSQTLQAARQQQEYHQSQIKQESLQEQQQTQSTLQQFPTHQVNERTTDDQIRPPNPKSAKHYAPDLKPFACSICNKHYGRKGSLRIHVRTHTGEKPFECSYCERRFYHSSHLYEHIRRHTGEKPFQCALCNKRFTIKGELTMHMKSHTGEKPYPCTCCDRRCLTAADLKVHMRTHTGEKPFSCVTCGKKFATTYSLNSHIKTHTGERPYSCTVCDKMFTQSSHLNIHMRKHTGKKVCCKLCDAKFTHTSQLTVHIRKHTGKQPYKCTVCDKVCNYASELQTHMMKHTGEKFTCVTCDKKFQSASYLQEHTRTHTGENLSTCTVCNKQFTRHQYLEKHMRTHTGEKPYRCFTCGKKFTQGCSLKVHIRIHTGERPYCCTICDRRFTTSSDLSTHSKRHKKYINL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01123949;
90% Identity: -
80% Identity: -