Basic Information

Insect: Amphimallon solstitiale
Gene Symbol: -
Assembly: GCA_963170755.1
Location: OY720680.1:18876701-18885541[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00014 0.047 17.3 2.7 1 23 170 192 170 192 0.95

2 12 0.00011 0.037 17.6 1.4 2 23 197 218 196 218 0.97

3 12 6.9e-08 2.3e-05 27.7 3.9 1 23 224 246 224 246 0.99

4 12 1.5e-05 0.005 20.3 1.8 3 23 254 274 252 274 0.96

5 12 0.00019 0.063 16.9 0.0 3 23 282 302 280 302 0.95

6 12 8.6e-06 0.0028 21.1 3.9 1 23 308 330 308 330 0.99

7 12 8.3e-07 0.00027 24.3 0.1 1 23 336 358 336 358 0.98

8 12 0.00012 0.041 17.5 0.7 1 23 364 386 364 386 0.98

9 12 4.5e-06 0.0015 22.0 0.9 1 23 392 414 392 414 0.99

10 12 1.9e-05 0.0062 20.1 2.1 1 23 420 442 420 442 0.98

11 12 0.00082 0.27 14.9 4.7 1 23 448 470 448 470 0.98

12 12 1.4e-06 0.00046 23.6 1.1 1 23 476 498 476 498 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00014	0.047	17.3	2.7	1	23	170	192	170	192	0.95
2	12	0.00011	0.037	17.6	1.4	2	23	197	218	196	218	0.97
3	12	6.9e-08	2.3e-05	27.7	3.9	1	23	224	246	224	246	0.99
4	12	1.5e-05	0.005	20.3	1.8	3	23	254	274	252	274	0.96
5	12	0.00019	0.063	16.9	0.0	3	23	282	302	280	302	0.95
6	12	8.6e-06	0.0028	21.1	3.9	1	23	308	330	308	330	0.99
7	12	8.3e-07	0.00027	24.3	0.1	1	23	336	358	336	358	0.98
8	12	0.00012	0.041	17.5	0.7	1	23	364	386	364	386	0.98
9	12	4.5e-06	0.0015	22.0	0.9	1	23	392	414	392	414	0.99
10	12	1.9e-05	0.0062	20.1	2.1	1	23	420	442	420	442	0.98
11	12	0.00082	0.27	14.9	4.7	1	23	448	470	448	470	0.98
12	12	1.4e-06	0.00046	23.6	1.1	1	23	476	498	476	498	0.99

Sequence Information

Coding Sequence: ATGGATGAGAATTTAGcaataataacaaatataaatcgACTGTGTAGAACATGTTTAACAGAAAAAGCAGAAGAAGATTTACAGTCAATTTTCGAAAATTCAATTGATATCTTGTTAAATGACCTAGCAGATGTTAAAGTAACAGCAAATGATGGTTTACCAAGCTACATGTGTAAAGACTGTGAACTTCAGTTAGGAATTGCTCATTCATTTAAAGAACGATGTAGAAAATCAAATGCTCaattaaaagaattattattgCCACCATTTACTATAGAGGAAAAAGCATATGTCATTCATATAAATAACACTGTTGCTGCACAAAATGATCATAATCCTACAATTCCAGAGGTTAATTCGCTTGAAACAAATTTTAAAGATGAGGTATCGATAGAAATACCAAAGCTTAGTTGTACAGATATTGATACAGAAGATAATAATTATGATGAAGGCGAAGAGTTAAAATCTGAAAATGAAGAAAACAGTTCTATTAAACCTAAGCCAAGGTATGAATGTTCTGAATGTGGTAAAACCTTTAGATTAGAGAGTTGTCTCAAGACACATTCTGTAAGACATGGAAGAAAATTAACATGTGAAGTTTGTCAAAAGGAATTTAATCTTGTCAAACATCTGAATGCTCATTTGAGGACTCATACTGACTATAAACCATACTATTGTAAAATTTGCAAGAAATCCTTCACCATGTCCAACAACTTGACAAAGCACATGAGAACCCATGGTGGTGAAAGAAGGCACTTATGTACATTATGTGGAAAAGGATTTTACGAACCAGGACATTTATCAATTCATATGAGAACACATACTGGTGAGAAACCCATTATATGCAGCATTTGTGGCAAAGGTTTTGCAGACCCACGCGGTTTAGTGGCTCACAACAAAATTCACACAGGAGAGAAAAAATATGAATGTACCATATGCaAAAAAAAATTTGCTCACTCCTTTATGCTGACGGCCCATAAACGAACTCACACCGGAGAAAAACCATACATATGCTCAATATGTGGCGCAGCTTTTGCAACATCCTCCTATTTAACAATACATACGCGAACACATACGCAAGAGCGACCATACAAGTGCGAATCATGTCCCAAGGCTTTCGTCAGCAAATGTGCACTGGTAGCTCACAATATGACTCACACGGGAGAAAAGAAATTTCAGTGTTGCATATGCGGAAAAAGAACAGGTCGAGCAGCTGACTTAACAATACATATGCGATCACATACTGgtGAAAGACCATACATTTGTGATCAGTGTCCAAAAAAATATCACACGTCCAGTAATCTTGCTGCGCACAAAAAAACACATTTAGGTATTAGAGAACATGTGTGTTCATATTGTGGGAAAGCTTTCGGAGATTCTAGAACACTCAAGTGTCATACTCGTACCCACACAGGTGAAAAACCTTATGTTTGTCACATATGCGGAAGCAGATTCACCCAGTCAGGACAACTAGCAGCCCATCGCAAGACACATAAATTTTCAGCGGAAAATGGGGCTAAAGTTCCTACTACCACCTTCAAGACTCAATAA
Protein Sequence: MDENLAIITNINRLCRTCLTEKAEEDLQSIFENSIDILLNDLADVKVTANDGLPSYMCKDCELQLGIAHSFKERCRKSNAQLKELLLPPFTIEEKAYVIHINNTVAAQNDHNPTIPEVNSLETNFKDEVSIEIPKLSCTDIDTEDNNYDEGEELKSENEENSSIKPKPRYECSECGKTFRLESCLKTHSVRHGRKLTCEVCQKEFNLVKHLNAHLRTHTDYKPYYCKICKKSFTMSNNLTKHMRTHGGERRHLCTLCGKGFYEPGHLSIHMRTHTGEKPIICSICGKGFADPRGLVAHNKIHTGEKKYECTICKKKFAHSFMLTAHKRTHTGEKPYICSICGAAFATSSYLTIHTRTHTQERPYKCESCPKAFVSKCALVAHNMTHTGEKKFQCCICGKRTGRAADLTIHMRSHTGERPYICDQCPKKYHTSSNLAAHKKTHLGIREHVCSYCGKAFGDSRTLKCHTRTHTGEKPYVCHICGSRFTQSGQLAAHRKTHKFSAENGAKVPTTTFKTQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00434317;
90% Identity: -
80% Identity: -