Basic Information

Gene Symbol
Trerf1
Assembly
GCA_963170755.1
Location
OY720676.1:113772599-113794043[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.6e-13 3.3e-09 39.9 0.1 2 46 61 105 60 105 0.97

Sequence Information

Coding Sequence
ATGTATTTGGACTTCGCCTGCTGTGCAGCAATTCCAGGTGGTGGTCGGAATAAAGAATACGCCATGCATGTTCTACACTTAACTGGTGGCAATATACACGAGGCGATGCTCAAACTCATGCAGCCGATACCGTCGTTGCCATCCGATAATCCGCTGCATTACTATCACTATAACGAAAGTGATAAGTGGACGGTTTCAGAAACGGAACTATTCCACCAAGCATTGCTCAAGTATGATAAAGACTTCTCTGCAATTGCTCAAGAGGTTGAAACAAAGACTATCAAGCAATGTATCCAATTTTATTATATGTGGAAAAAGGTTTGTGTGGATGAGTACAAACGACTGAAGCAGCTAAGAGAGCGAAGATCGGGATTTCTGAAATTAGCTGAGCACGAGCAAGAAGAGAAGCCGTATCCAGATGCCAAATTATTAGGAATAGCAGATACTGGTTCGCCTATACAGGATCATCGAAATTTTATATGCGAGTTCACAGATTGTTCCGCGAGTTTTAATTCGAGAGCGGCATTAAATGGTCACATTAGAATCCATGGTGGTACCGCTAGGAATTCTCCCACGTATTCCCAGGTTTCGCACGAAAGGCGGCCGCCTTCTGTTACGTCTTCTCTCTGCCACTCGACTGATCCCACCGAAGACTATCCTTGTAAGATATGTGGGAAGGTGTTCACTAAAATAAAAAGCCGCAGTGCTCATATGAAGTCTCATCGCCCGCCCGATGCAGAACCAATCAAACGCAAGGAGAAAGATGTTATGGTGTCTTCTAATTTCGATACTTCCGTACCGAGTCCTTTCAGCACTTAG
Protein Sequence
MYLDFACCAAIPGGGRNKEYAMHVLHLTGGNIHEAMLKLMQPIPSLPSDNPLHYYHYNESDKWTVSETELFHQALLKYDKDFSAIAQEVETKTIKQCIQFYYMWKKVCVDEYKRLKQLRERRSGFLKLAEHEQEEKPYPDAKLLGIADTGSPIQDHRNFICEFTDCSASFNSRAALNGHIRIHGGTARNSPTYSQVSHERRPPSVTSSLCHSTDPTEDYPCKICGKVFTKIKSRSAHMKSHRPPDAEPIKRKEKDVMVSSNFDTSVPSPFST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00070966;
90% Identity
iTF_00070966;
80% Identity
iTF_00070966;