Asol018667.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720675.1:167547050-167547391[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-06 0.00016 24.5 0.0 2 39 16 53 15 58 0.85
Sequence Information
- Coding Sequence
- atgACGAGAAAGTATACAAGGAAAACCACAATTCTTTCATATACGACAGAAGATTTACAAAACGCATTATTTGCGATAAGAAATGATGGCAAAAAAATAAGGGACGCAGGAAGGGCCTTCAATATTCCTGAATCGACGCTCAGAAAAAAACTGTCAGAAAATCATCCGACGCCACCTCGTCTGGGTTGCAAGCCTGTGTTTTCAGAGGAAGTAGAATCTGAGTTAAGAGAGTACATTTTAACGCTAGCAAAGCTATTCTATGGCCTAACACCCAAGTGTCTTAGACGACTAGCTTTTCGGTACGCTGAGCAGCATAACAATGTTCATAAATTCGACAAGTAA
- Protein Sequence
- MTRKYTRKTTILSYTTEDLQNALFAIRNDGKKIRDAGRAFNIPESTLRKKLSENHPTPPRLGCKPVFSEEVESELREYILTLAKLFYGLTPKCLRRLAFRYAEQHNNVHKFDK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00031842; iTF_00067938; iTF_00067939; iTF_00067940;
- 90% Identity
- iTF_00067938; iTF_00067939; iTF_00067940;
- 80% Identity
- iTF_00067938; iTF_00067939; iTF_00067940;