Basic Information

Insect: Amphimallon solstitiale
Gene Symbol: -
Assembly: GCA_963170755.1
Location: OY720680.1:84909890-84912509[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.2e-06 0.00017 24.4 0.0 3 42 16 54 14 56 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.2e-06	0.00017	24.4	0.0	3	42	16	54	14	56	0.90

Sequence Information

Coding Sequence: ATGCCAAGATACGTTAGAAAAACCAACAAAGGTGATTGGTCGGTAGACACAATGAAAAAGGCCCTAAAATTTATTCGAGAAGGAGGAAAAATAAGAGAAGCCAGTCGTAAATTTGGAATTCCTGAATCCACAATtcgaaaaaaaaagaaggaatattACGAAAGCAACGAAGTCATTGAATCCCGTTTGGGCCGGAAACCTACATTTTCACCTGCAGAAGAAAAAGAACTTGTGGATCATCTAATACATATGGCCAAATTGTTTTATGGATTAACTCGTATAAAACTTAgacaactatactccattcagtctaagaataaaactgaatggagtatagctTTTAATTACGCGGAGGCCAATAACAAGCCACACAGTTTTAACAGAGAAATCAAGATGGCAGGGAAAGCATGGTTTAAAAATTTTATGGAACGAAATCCTCAAATTTCTCTTCGAAAACCCGAGTCTACAAGCCTCAATAGAATTACTGGTTTTAACAAAGAagagttaaaattattttttaacaatcTGGAAAAACTGTTGAGACGTTATAATATCAAGGAGGATAGGTTGTTCAATGTTGATGAAACTGGTGTAACAACCGTGCATAGAGCATCGAAGTGCTTAGCTCCAAAAGGTGTCAAACAACTAGGGGCAAAAAGTTCTGGAGAAAGGGGTCAAAATGTGACCGTTATTTGTTGTTTCAACGCTAGTGGAACAACTTACATTCCTCCAATGTTTATATTTCCAAGGATTAGAATGGCTAATAGTTTAACAAGAAATGGTCCTATCAATGCAATTTATCGTTGTTCTAAATCTGGATGGAGCAACGAGTCTCTATTCTATGAATGGTTGGTTCATTTTCAAAAGGTTGCCAAATCGAGCAAAGAAGATCCTGTTTTACTCGTATTAGACAATCATTCTAGTCATATCTcatcaaatatttttgatttttgcaAGGACCATGGAATCAATATGGTTACAATTCCGCCTCATACTTCTCATCGAGTGCAGCCCCTCGATGTGTCTTTCTTCGGTCCTCTGAAAAACGCGTATAACCGAAAATGTGAACTTTTTCTTACACAACGAGAAAGAATTACGACAGATGACATTGCCGAAATATTCAATGCTGCATACCTTCAGGTTGCAACGATGGAAAAAGGGATTTCTGGCTTTAGGGCCACCGGAATTTGGCCTTTCAACCCCGATATCTTTTCCGAAGAAAGTTTCATGCCAGCGAAACATCATAGTGCTGTTGAAGAAACAAGAGAGTCTAGCCAACCAAGCTGCAGTGAAGATAACGTCGCAAATGTTCACGAAGAAAGTCCACTGTTAACACCGCCATCAGCTCCAAAGGAGGATGTACAGCCAGGCTGCAGTAAAGCTCACGTCAGTATCCAAGAACTAAGTCCTGTGCCAACACCACAATCAGTGCCAAAAAAACGAAATCGAAGCAAACAGACTTCGGAGATATTGACAAGTACGCCAAACAAAGAAAAACTTGTTGAAAATGAACAAAGGAAAAAGCTTAGGCAGGAAAGTTTACAGAATCGTCTtggtttaaataataaaaattatactaaaataaaaaataaaaaaaccgaTCGAAAATTAACTAAAAAGAGAATATTTACTGAAACATCATCTTCGGATGCTGATGTTGAAGCTGATGAAATCTGTAACGACGATGAGTTGGATGATATTTCCTCAGACGATATCCAGGATGTATGCGCCCTCTGCGGTGACTCCAGTAAGAAAAACGAACTGTGGTACAGGTGCACCATTTGCAGTAGATGGGCTCACAGCTTATGCACGGGATGGGATTCACCGGAAGGGTTCGTTTGTGATTTTTGCGATAAATAA
Protein Sequence: MPRYVRKTNKGDWSVDTMKKALKFIREGGKIREASRKFGIPESTIRKKKKEYYESNEVIESRLGRKPTFSPAEEKELVDHLIHMAKLFYGLTRIKLRQLYSIQSKNKTEWSIAFNYAEANNKPHSFNREIKMAGKAWFKNFMERNPQISLRKPESTSLNRITGFNKEELKLFFNNLEKLLRRYNIKEDRLFNVDETGVTTVHRASKCLAPKGVKQLGAKSSGERGQNVTVICCFNASGTTYIPPMFIFPRIRMANSLTRNGPINAIYRCSKSGWSNESLFYEWLVHFQKVAKSSKEDPVLLVLDNHSSHISSNIFDFCKDHGINMVTIPPHTSHRVQPLDVSFFGPLKNAYNRKCELFLTQRERITTDDIAEIFNAAYLQVATMEKGISGFRATGIWPFNPDIFSEESFMPAKHHSAVEETRESSQPSCSEDNVANVHEESPLLTPPSAPKEDVQPGCSKAHVSIQELSPVPTPQSVPKKRNRSKQTSEILTSTPNKEKLVENEQRKKLRQESLQNRLGLNNKNYTKIKNKKTDRKLTKKRIFTETSSSDADVEADEICNDDELDDISSDDIQDVCALCGDSSKKNELWYRCTICSRWAHSLCTGWDSPEGFVCDFCDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00067905; iTF_00067886; iTF_00067888; iTF_00067891; iTF_00067892; iTF_00067895; iTF_00067897; iTF_00067898; iTF_00067899; iTF_00067900; iTF_00067901; iTF_00067902; iTF_00067903; iTF_00067904; iTF_00067874; iTF_00067889; iTF_00067881; iTF_00067882; iTF_00067885; iTF_00067855; iTF_00067890;
90% Identity: iTF_00067905; iTF_00067886; iTF_00067888; iTF_00067889; iTF_00067892; iTF_00067895; iTF_00067897; iTF_00067898; iTF_00067899; iTF_00067900; iTF_00067901; iTF_00067902; iTF_00067903; iTF_00067904; iTF_00067874; iTF_00067881; iTF_00067882; iTF_00067885; iTF_00067890; iTF_00067891;
80% Identity: -