Asol082374.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Amphimallon solstitiale
Gene Symbol
-
Assembly
GCA_963170755.1
Location
OY720678.1:117396372-117398357[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.3e-06 0.00012 24.8 0.0 3 37 17 51 15 57 0.89

Sequence Information

Coding Sequence
ATGGTTCGAAATCGCAAGAGATCGTCGAGCCAGCAGAACTGGAGTGCAGATAATATGCTAAAGGCAATAGAAGCGGTTCACAATGGAATGGCTTGGAAGACTGCAAGCAAGAACTTTTCTGTTCCGAGGGCTACACTTAAAAGACGAGTGTTAAACAAAAATAAGGATGCAGtttcaaataagaaaattttagGCGCCAAGCGGTCAGTATTTACTCCAGATCAAGAAAAAGAACTCGTAGACCATATACTTAAGATGGAAGAAACATTTTTTGGTTTGACTACGAAAGACATACGATATATGGCGTTTAGTTTggcggaaaaaaataaaattaatcatcCGTTTAATAAAGAACTTGGTTTAGCTGGAGAAGACTGGCTGAGCGGTTTCCGTAAACGTCATCCAGAACTTACCTTGAGAAAGCCAGAGGCAACATCGGCTGCTAGGGCCCAAGGTTTTAATAAACCCAACGTCGAAAAGTGTTTTCAGTTGTTAAAGTCTGTAATGGATAGGCATAATTTTCCGGCTCATCGTATATTTAATGTGGACGAAACAGGTGTCACCACTGTTCAAACAAAATCTTCAAAAGTTTTGGCACAGAAGGGACGTCGACAAGTTGGTAGCATAACATCGGCTGAACGTGGTCAATTGTCCACAGCAGTTATATGCATGTCCGCTGGAGGAAATTATGTTCCTCCAATGCTGATTTTTCCAAGGCAGCGGATGAAACAAGAATTAACCGATGGCGCTCCTCCTGGCACAATATTTGCTTGCAATAAATCAGGATGGATGCAACTCGAAATATTTTCTTCCTGGTTTGAACATTTTATAAATCATACGAAGCCTACTGCCAAAGACCCAGTACTTTTGATTCTTGACGGCCATATGACTCACACAAAAAACCTTGCCGTAATTGAAAAAGCACGAGATAACAACGTTACCATATTGTGCCTGCCTCCACACTGCAGCCACAAGTTGCAACCGTTGGATAGATCATTTATGTTTCCGTTAAATACGTTTTACGTTAGTAGCATTGAAAAGTTTCTACGTAATAACCCAGGAAGGACGGTTACACaattccaaatttcaaaattgtttGGTGAAGCGTATTTAAGAGCTGCAACGCCTACCACGGCTATTAATGGGTTCAGAAAATGTGGAATCTGTCCTTACAACCCCGACGTCTTCACAGATGTAGATTTTGCGGCCTCAGAAGTTACGGATCAACCATTGATGCAAAATTCACAGCAAAAAGTATTGGATGAACCTGCTGAAATCTCGACTGAGATTGAATCTAAACGTAGCTCAAGCTCCACGTTGATGTTTCCAAATAGTCCAAGATCCCCTCAGCCCTGTTCAAGCTCCATGAACACGTTTCCAAATTGTCCTCCAAGTCCTCAACCAACTTCTTCTTGCAGTGGTGGCATTCGTAGTGCGTTTCTCGTTAGTCCTAAAGACATCAATCCTATTCCCAAAAGCACTCATATTAGAGTTCAAAAAAGAAAGAGGGGAACAGCCACAATTTTGACTGACAGCCCATATAAGAATGAATTACAGAAAGAGAGAGATACGAAGGAGGAAgctgaaaaacaaaaactgaagaGGCAAGACCAAAAAAGACTTAAACAAACGTGCAAAAATGTGTTTCAAACTCAAATAGAGACGGAAGCGTCAACATCCCAGAAAAGGACTAAAAGTCTCAAGAAATCTAAAAAACTCGCTACGAACAATCACTCTTCTAGTGATGAAAGTGGCGATCCAGAAAACGACACAGATGATGCAGAATGCCTGTTCTGTGGAGACACCTATCTCCCATCAAGAACTGGGGAAGGATGGGTGCGGTGCATTCAATGTCTTCAGTGGGCCCATGACCAGTGTGCAGGAGTCGAGGAAAACGACGAGGATTATACCTGCGACAATTGCGTTTTacatagatttttattttttgtaatagtttctgtaaaattgctattaaactcttattaa
Protein Sequence
MVRNRKRSSSQQNWSADNMLKAIEAVHNGMAWKTASKNFSVPRATLKRRVLNKNKDAVSNKKILGAKRSVFTPDQEKELVDHILKMEETFFGLTTKDIRYMAFSLAEKNKINHPFNKELGLAGEDWLSGFRKRHPELTLRKPEATSAARAQGFNKPNVEKCFQLLKSVMDRHNFPAHRIFNVDETGVTTVQTKSSKVLAQKGRRQVGSITSAERGQLSTAVICMSAGGNYVPPMLIFPRQRMKQELTDGAPPGTIFACNKSGWMQLEIFSSWFEHFINHTKPTAKDPVLLILDGHMTHTKNLAVIEKARDNNVTILCLPPHCSHKLQPLDRSFMFPLNTFYVSSIEKFLRNNPGRTVTQFQISKLFGEAYLRAATPTTAINGFRKCGICPYNPDVFTDVDFAASEVTDQPLMQNSQQKVLDEPAEISTEIESKRSSSSTLMFPNSPRSPQPCSSSMNTFPNCPPSPQPTSSCSGGIRSAFLVSPKDINPIPKSTHIRVQKRKRGTATILTDSPYKNELQKERDTKEEAEKQKLKRQDQKRLKQTCKNVFQTQIETEASTSQKRTKSLKKSKKLATNNHSSSDESGDPENDTDDAECLFCGDTYLPSRTGEGWVRCIQCLQWAHDQCAGVEENDEDYTCDNCVLHRFLFFVIVSVKLLLNSY