Basic Information

Insect: Amphimallon solstitiale
Gene Symbol: clz9_226
Assembly: GCA_963170755.1
Location: OY720679.1:142049386-142052022[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.6e-06 8.4e-05 25.4 0.0 1 38 16 54 16 58 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.6e-06	8.4e-05	25.4	0.0	1	38	16	54	16	58	0.90

Sequence Information

Coding Sequence: ATGTCTGAACGAAATCTCGCCAAAAAATATTGTCGATTTCGATACAAAGAGGAAGCTCTTGCTAAAGCTCTTCGGGACATAAAAGATGGCATTGAAACTTTAAACGGGgcttcaaaaaaatatggtattcCTAAATCGACCCTACACAACAAAATAACTCAGAAGACGCCTAACATTAGGAAAATGGGTCCCCAGCCGGTTTTaaatgaattagaagaaaatcgCATAGAACAGTGGATAACGGCTAAAGCGATGTTAGGATTTCCAATGCATCCATCTGAAATTAAAGATGCTGTTcaaaaaattttaacagaaaccAGTCGTCCAAATCCATTTAAAGAAAACAGGCCTGGCGAAAAATGGCTAAAGTTATTTTTACAAAGACATCCAGATGTTGGAAAGCGTAATACGGAAATTATTTCCAAATCACGTGCAGCAGTAACCGAAAGTGCAATTAGAGGATGGTTTTCGGAAATGAAAACATATTTGATAGAACACGATCTTTTGGATATGATGGAAGATCCCTCTAGAATTTACAATGCCGACGAAACCGGGGTGAGAACTTGTGTGAAATCAGGGTTGGTATTGGGGCCGGTgtcaaaacaattgaaaaatttatATGAAGTCTCATCTGGAAACGAGAAAGAATCAATTACTGTTTTGTGCACCTATGGCGCATCAGGCGTTGCAGCTCCTCCTATGGTGATTTTCCCTTATAAGAGAATTCCGAAGGAGCTAGCTCTGTCAGTTCCAGGTGATTGGGCAACTGGACGCTCGGACTCTGGTTGGATGACCGGGGCAACTTTTTTTGAATATGTTGCGAACGTATTTTACAATTGGCTTATAGAAAAACAAATCACATTGCCGGTCATTTTATTCATTGATGGACACAAGAGTCACTACAGCATTGAATTGTATGAGTTTTGTATCGaaaaaaacattgttttatattgtctttatcCCAATTCGACTCATATTTTGCAACCATGCGATGTCACTATATTCAAACCATTAAAATCGGAGTGGAAGAAAGCTTGTCAAGCTCACAAACAAAGATCTAGTGCAGCTATAACGCGCCACAATTTCTGCCCTTTGTTTAAAGAAGCTTATGATAAATCATCACAGGCCAGTTCCATTATAAATGGCTTTAAAGCTTGTGGACTCTACCCATTAAATCCAGACAATGTCGGTTATTCTAAATGCATATCGTCCAGAAGGAAAGAACTTTTCCCAAAACAAGAAGTAGAAACTGATGGCTTAACTTTCCAAGACTACAAGTCctgtttaaaagtaataaatcaCTTCTTGGGTGCAGCAAAAATTGCCGAATATGAGAATCTTGAAAACGAAGCTACAACCGAAGATACTACTTATAAACTTTGGAAGTTTTGTGAAGATTCTACGATTGAAAACAGAATTATTCCTTTGGCAGAAAACAAACTAGAATCCGATTTTGACAACGGAAATCCAGAATTTTCTTTTGATTTGACAGAAACATTCTTGAATGACTTGCCCCTTGAAATAGATGGAGTTTTATATTCGCCATACGGAAACGACAAATCTCTTCAAATTGACGACAACAGTATGCATGTACTAGATGCGATCCAAAGTATTTTTTCTCActgtgaaaaaaaaaatagtgatgaTCTAACCAAGCAAAACCTTACTGATATTACGATAAAAAATCAAACTAGTCAACTAATGCGTGATGTAGATGTAGAAGAAAAGATATTTATGTGCCAAGTTATAATTGAAGCAATTCTAGACCACGTCTTTGAGGCTGTTGAAAAGAAGACCTTGGTTAACCCAAATGTGATTTATACCTCTGATACCAAATCGAGCGTACCTGAGAACACGGAAAGTGATAAAAAGATACAAATTCTTTCagatattattattagaaaaaagcGAAACACCGACGATGAAGTTTGGGCAAAACATTTACATTGGCCACATCAACCCGAAAAAGTTCAGAAACGGAAGACTAATAAACAAATGCCCTTCGCAATAACATCGTCGAAATGGTTGAAATTTTATGAACAACAAGAGAACgtgaaaaaagaaaaagaagaagcacTGAGGGTCAGAAAACTTGAAAGAGAACAGAAAAGAAATACCTCTGAAACTCCAAAAAAGACGGGGATTAAAAGAAAGCCAGATAGAAAAGAAGATGACCACAAAACGATAAAGAACAAAAAACTCAGAAAAGATGAGAAAACGAGTAACTCTCAACCAGAAAAAAAAGGAGTAAgtgaaagaaaacaaacaagaaaggaAGTCGATGAAAACAGTAATAGTTCCGAAGATAACCTATTGGAAATAAAAGAGAAACAGACCACAAAAACTAAGAACAAATCTGAAAACGAACCTTCGATTAAGGAAGTAGGAGAAACTACAAATGTTCTGAAAGTGGGAGATTATGTAATAGTAGAATATGACAGTAAGCACTATCCAGGAATAATTAAGACAATTGACCAAAAGCAATATGAAATAAGCGTAATGGAGCAAACTTCCAATAAAAAATGGAAATGGCCAAAATGTGCAGACCAAATTTGGTACAAAAGGCACCAAATAGTGAAAAAAATTCCGGAACCTGAACCTTTAAATTCTCGACGCATTTATGACATCCAAATTTAG
Protein Sequence: MSERNLAKKYCRFRYKEEALAKALRDIKDGIETLNGASKKYGIPKSTLHNKITQKTPNIRKMGPQPVLNELEENRIEQWITAKAMLGFPMHPSEIKDAVQKILTETSRPNPFKENRPGEKWLKLFLQRHPDVGKRNTEIISKSRAAVTESAIRGWFSEMKTYLIEHDLLDMMEDPSRIYNADETGVRTCVKSGLVLGPVSKQLKNLYEVSSGNEKESITVLCTYGASGVAAPPMVIFPYKRIPKELALSVPGDWATGRSDSGWMTGATFFEYVANVFYNWLIEKQITLPVILFIDGHKSHYSIELYEFCIEKNIVLYCLYPNSTHILQPCDVTIFKPLKSEWKKACQAHKQRSSAAITRHNFCPLFKEAYDKSSQASSIINGFKACGLYPLNPDNVGYSKCISSRRKELFPKQEVETDGLTFQDYKSCLKVINHFLGAAKIAEYENLENEATTEDTTYKLWKFCEDSTIENRIIPLAENKLESDFDNGNPEFSFDLTETFLNDLPLEIDGVLYSPYGNDKSLQIDDNSMHVLDAIQSIFSHCEKKNSDDLTKQNLTDITIKNQTSQLMRDVDVEEKIFMCQVIIEAILDHVFEAVEKKTLVNPNVIYTSDTKSSVPENTESDKKIQILSDIIIRKKRNTDDEVWAKHLHWPHQPEKVQKRKTNKQMPFAITSSKWLKFYEQQENVKKEKEEALRVRKLEREQKRNTSETPKKTGIKRKPDRKEDDHKTIKNKKLRKDEKTSNSQPEKKGVSERKQTRKEVDENSNSSEDNLLEIKEKQTTKTKNKSENEPSIKEVGETTNVLKVGDYVIVEYDSKHYPGIIKTIDQKQYEISVMEQTSNKKWKWPKCADQIWYKRHQIVKKIPEPEPLNSRRIYDIQI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00067652; iTF_00067622; iTF_00067654; iTF_00067658; iTF_00067634; iTF_00067668; iTF_00067638; iTF_00067646; iTF_00067642;
90% Identity: iTF_00067646;
80% Identity: -