Basic Information

Insect: Amphimallon solstitiale
Gene Symbol: cheC
Assembly: GCA_963170755.1
Location: OY720677.1:88181814-88183703[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.2e-06 6.5e-05 25.7 0.0 2 38 16 51 15 57 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.2e-06	6.5e-05	25.7	0.0	2	38	16	51	15	57	0.91

Sequence Information

Coding Sequence: ATGGTGCGCAATTATGTAAGAAAATCTAAACAGCATAGTTGGGAAGAGGAATCGATGATTGCTGCTCTAACATCTGTAAAAGAAGGAATGTCCGTAAATGCAGCGGCAAAACAGCATAATGTTCCTGTAGCGACTCTCTTTAGAAGGAGCAAAATGCAAGGAGAGTTAGATACTTTGGCTCAGAAGAAATTGGGGAGGTACCGAACCACCTTCACACCTGAGCAAGAAAAAGAGTTGGCCGCTTATCTTCTTGAAATGGATCGACGTCTGTTCGGCCTGACGATCCAAGACCTGAAATCAGTTGCATTCCAATATGCCGAGCTAAACCACATTCCaaattattttaataaggaaacAAGGAAAGCTGGCTGGGATTGGGTGCATGCATTCATGAAGAGAAACCAACAGCTTTCTCTTCGCTTACCCGAAAACACTTCAGCAGCCAGAGCATCCGCTTTCAATGCAACAAATGTCAAACGATTTTTTGACCTCTTAAATGAATTATACAATCAACACAACTTTACCGCAAGCCGCATTTACAATGTTGATGAGACGGGGATATCAACTGTGCCCAACAAGCCATCCAAAATAATATCGAAGAAAGGAAAAAAACAGGTTGGCAGTTTAGCTTCGGCAGAAAGGGGGACGCTGATTACAGCAACGATTTGCTTCAGTGCTGCTGGAAATTATGTCCCTCCTCTTCTGATTCTTCCACGAGTGAGAAATAATCCTCTTTTTGAAATTGGCCTACCTCCAAATTCCGTAGTTGCGCCTCACAAAAGCGGATGGATGCAGACCGACATTTTTGTTCAGTGGTTTGAACATTTTCTAAAACATACAAAACCTTCTGAAGAGGATCCGGTTCTGCTCATTCTGGATGGACATGCCACCCATGTAAAAAACATTCGGCTAATAGAAATGGCTAAGGAGAAGCATGTAAAAATTTTAGTTATACCACCCCACACGTCGCATAGACTCCAACCCTTGGATGTGACGTTCATGTTTCCTCTGTCGGCATATTACGAACAAGCTGTTCGAGTTTGGTTGCGTGAAAATCCAGGCAAGGTTGTGACTGTTCTTCAAGTAGGAAAATTGTTTGGTGAGGCTTATAACCGGGCTGCTACAGTTCATAACGCAATGTCTGGGTTTTCGAAAACTGGAATTTATCCGTACAAACCAAATTTCCCTGATAATGTTTTTGAAGCAGCTGAAACAACAAATCGACCTCCAGTGCCTGGCTCGGAATCTAGTAACTCAAATCCTACGTTAACACTACATTCAGATGCTCCGACACCGGATAGACATTTAGGTTTAACAGTTTCACCACACCAGATCTTGCCAGTTCCTAAAGCTCCAATGAGATCCACTGAGGAAAAGAAACGAAAGAGGGGAACGTCAATGATACTCACAACTTCACCATATCTCGAAGAGCTAAAACAACTTAAAGCATCAGAAATGGCGAAGACAGCACAAACATCCAAAGCCAAGAAGAAAGTCAAAGCGAAATTATTTCAAGAGCCTGCCAAAACGGATACAAGTTCGGAAAGCGATGGCAACCTAAGTCTGCACGACTCAGACAGTGATTTGGACTATTTATCGCCTGATGAAAATGAACAAAGAACTCCTGACAAAATCACAGAAGACATGTTAGCAGTTAAGAGCTGGGTTCTTGTGGAATATAACTGTCAGTTGTACCCAGGCCAAGTGAAGGCAAAGAATTATAAAGGAGTGTCTGTAAGTTGTCTAGAAAAGACACAGAAATATTTCAAGTGGCCACAAAAGGAAGACCAGCTCTTCTACGAGTGGAGTCAGGTAAAGAAAATGATTCGCACCCCGAAAAAACTAAAAAGGGGCTTTTTCGATATTCCAGAGATATCTTCTTATGTTTAA
Protein Sequence: MVRNYVRKSKQHSWEEESMIAALTSVKEGMSVNAAAKQHNVPVATLFRRSKMQGELDTLAQKKLGRYRTTFTPEQEKELAAYLLEMDRRLFGLTIQDLKSVAFQYAELNHIPNYFNKETRKAGWDWVHAFMKRNQQLSLRLPENTSAARASAFNATNVKRFFDLLNELYNQHNFTASRIYNVDETGISTVPNKPSKIISKKGKKQVGSLASAERGTLITATICFSAAGNYVPPLLILPRVRNNPLFEIGLPPNSVVAPHKSGWMQTDIFVQWFEHFLKHTKPSEEDPVLLILDGHATHVKNIRLIEMAKEKHVKILVIPPHTSHRLQPLDVTFMFPLSAYYEQAVRVWLRENPGKVVTVLQVGKLFGEAYNRAATVHNAMSGFSKTGIYPYKPNFPDNVFEAAETTNRPPVPGSESSNSNPTLTLHSDAPTPDRHLGLTVSPHQILPVPKAPMRSTEEKKRKRGTSMILTTSPYLEELKQLKASEMAKTAQTSKAKKKVKAKLFQEPAKTDTSSESDGNLSLHDSDSDLDYLSPDENEQRTPDKITEDMLAVKSWVLVEYNCQLYPGQVKAKNYKGVSVSCLEKTQKYFKWPQKEDQLFYEWSQVKKMIRTPKKLKRGFFDIPEISSYV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00067522; iTF_00067523; iTF_00067524; iTF_00067525; iTF_00067877; iTF_00067527; iTF_00067464; iTF_00067528; iTF_00067465; iTF_00067529; iTF_00067471; iTF_00067476; iTF_00067508; iTF_00067125; iTF_00067511; iTF_00067515; iTF_00067516; iTF_00067517; iTF_00067520; iTF_00067498; iTF_00067500;
90% Identity: iTF_00067522; iTF_00067523; iTF_00067524; iTF_00067525; iTF_00067877; iTF_00067527; iTF_00067464; iTF_00067528; iTF_00067465; iTF_00067529; iTF_00067471; iTF_00067476; iTF_00067125; iTF_00067515; iTF_00067516; iTF_00067517; iTF_00067520; iTF_00067498; iTF_00067500; iTF_00067508; iTF_00067511;
80% Identity: iTF_00067471;