Asol089702.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Amphimallon solstitiale
Gene Symbol
clz9
Assembly
GCA_963170755.1
Location
OY720679.1:42166159-42168249[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.5e-06 8e-05 25.4 0.0 5 40 19 55 15 60 0.85

Sequence Information

Coding Sequence
ATGGTGAGAACTTACAAAAAAAAGTCTGATAGAGTAAACATAGATGAATTAGCTATACATTCTGCTGTAGAGGATGTCGTTAACGGAATCTTATCAATAAGAAAAGCCGCTAAAAAATATAACCTTAAACCTGCTACTCTACAACATCGAatagaaaagagaaaattaactGGTAAACCATTAAATGCAGCCGTTTATTCATCAAAATTTTCTAGTCAACAAGTTTTCACCAAAGAACAAGAAGAATTATTGTCAAAATACATAATTACTTGCAGTAAAATGCACTATGGTCTTACACTGCGACATTTACAAAGTTTAGCATATGCAAAAAAGTTAAACTGTAAATATCCTTCTAACTGGGATACTGCGAAACTTGCAGGTATAGACTGGACACAGGGTTTTCGTAAACGACATATAAATATCAGTTTACGAAAACCAGAGAATACAAGTTTAGCTCGATCAGCTGGATTTAACAAAACGGCAGTTGAACATTTCTTTAGCaatcttaaaaaggttttggaaaaatatcaatttacaGCAGATCGGATTATTAATTATGACGAATCTGGAATAACTACAGTTCTCAATACGCCAAAAGTTTTAGCTTCCAAAAGTCAGAAACAGGTGGGACAGATCGCTACTGCCGAAATAGGTGAACTCGTAACATTTGGTGGTATAATTTCTGCAGTGGGTAACGCAATTCCTCCAATATTTGTATTCCCCAGGGTTCATTATAAGAATCACTTTTTAAGCGAAGGACCTGAAAGTAGCTTGGGACTAGCCAATAAAAGTGGCTGGATTGTTACAGACCTTTTTTTAGATGTCctgaagcatgttcagaaacacACGTCGTGTAGTAAAAGTAATGCAATTTTAATGCTATGTGACAACCACGAAGCACACATATCAATCGAAGCTATTGAATATTCTCGAGCAAAtggcattgtatatttaacttttCCACCTCACACGTCACATCGACTACAACCTCTTGACGTAGGAGTTTTTGGTCCTTTCAAGAGTAAATTAAAAGTAGCTTTCAACAACTGGCACATAAATAACCCAGGAAGAGGTATAACTATTTACGACATTCCTAAAATTACGAAAACAGCATATTTAGAGTCGTTTACTGGAAAGAATATAATCAGTGGTTTTACAAAGGCTGGAATCTGGCCCTTTAATTCATTGGTGTTCAGTGAAGCGGATTTTGCACCCTCTGCTATCTATCACACAAGTACAGAAAACAATTTGGCTACTGTTGAAAATAATTTATCCCaagaaaaaaatcaaagaaaAGAAGCAGTTCCAATAGAGTTGATTCCGTCTACCTCAAGACAATTTACTCCTCCACGTGACGTAGATGCATCTAGTTCAAAACACCTTACTCCTCCAGGCACTATAATTACACCTGATGTAGTTAGACCTTATCCGAAAGCAAAaccaaaacaaaccaaaagaaaaGGAGCTGAAAAAGGGAAGTCACGAATTTATACGGATACACCTGAAAAAGATAGACTACAAGAGTTGTACgaaattaaacaaaagaaaagagaaatgaaaatagAGAGAGAAAATATCAGAAAACTCAAACAATCATCAAAGCGCATTTCAGAACAATTAACAGATGAAAAggctgtaaaaataaataaaactaaaaatacaaCTTATGCTGATTCTGATGGGACTACTAGTGTTTCAGACATGGAGTATGACATTATCAATAGTTCTTCAGATGCAGACTTTCTGGAGAATGAAGAGACCACTATTCTAAGCGTGGAAAATATGAAAAAACCTACACCAGAGGAAATAAAAGAAGGAGATTTCTTGTTAATACAATTTCCCAAAAAGAGACatgtagtttattatatatgtaatgTTCAAATATTACATAGCCCTACGGAGTATCAAGTTtcatatttaaggaaaaaatcGACGTCTTGGACTTTTGTATTTCCAACTATTGCGGATGTGGCAACAGCTGATTTAACTGATGTTATATTAAAGTTACCTGTGCCAATAGAGACAGGGGGAACAAGTCGTACTTCATCATTTTATTCATTTCCTGATTTTATGGCGTACAAtgtgttataa
Protein Sequence
MVRTYKKKSDRVNIDELAIHSAVEDVVNGILSIRKAAKKYNLKPATLQHRIEKRKLTGKPLNAAVYSSKFSSQQVFTKEQEELLSKYIITCSKMHYGLTLRHLQSLAYAKKLNCKYPSNWDTAKLAGIDWTQGFRKRHINISLRKPENTSLARSAGFNKTAVEHFFSNLKKVLEKYQFTADRIINYDESGITTVLNTPKVLASKSQKQVGQIATAEIGELVTFGGIISAVGNAIPPIFVFPRVHYKNHFLSEGPESSLGLANKSGWIVTDLFLDVLKHVQKHTSCSKSNAILMLCDNHEAHISIEAIEYSRANGIVYLTFPPHTSHRLQPLDVGVFGPFKSKLKVAFNNWHINNPGRGITIYDIPKITKTAYLESFTGKNIISGFTKAGIWPFNSLVFSEADFAPSAIYHTSTENNLATVENNLSQEKNQRKEAVPIELIPSTSRQFTPPRDVDASSSKHLTPPGTIITPDVVRPYPKAKPKQTKRKGAEKGKSRIYTDTPEKDRLQELYEIKQKKREMKIERENIRKLKQSSKRISEQLTDEKAVKINKTKNTTYADSDGTTSVSDMEYDIINSSSDADFLENEETTILSVENMKKPTPEEIKEGDFLLIQFPKKRHVVYYICNVQILHSPTEYQVSYLRKKSTSWTFVFPTIADVATADLTDVILKLPVPIETGGTSRTSSFYSFPDFMAYNVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00067546;
90% Identity
iTF_00067691; iTF_00067533; iTF_00067537; iTF_00067538; iTF_00067539; iTF_00067445; iTF_00067542; iTF_00067514; iTF_00067595; iTF_00067601; iTF_00067576; iTF_00067794; iTF_00066841; iTF_00067546; iTF_00067774; iTF_00067504; iTF_00067575; iTF_00067481; iTF_00067578;
80% Identity
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