Asol048992.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720677.1:27585663-27587620[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.5e-07 4.5e-05 26.2 0.0 1 38 15 52 15 56 0.95
Sequence Information
- Coding Sequence
- ATGGTGCGGACATATAAACGTAAGACTGATAGGGCGCAATGGTCAGAAGACAACATGAAAAATGCTATCAAAGCAGTTCTGGAAGAGCGAATGGGGACTTTGTTATCTTCAAAAACCCATGGAGTGCCACGAACAACATTACAAAGGAGAGTTAATTTTGCTCGAAAATATCCAAACATACCACAATTAATGAAGGTTCCTTTGGGTCCAAAGACCACAGTGTTTACCGTCGCCGAAGAAAACGAACTTGCGACTTATATTGTAGACATGGAAAGTAGACTTTTTGGTCTTACAACCAGGGATGTAAAAATCTTAGCGTACCAACTGGCAATAAGAAACAACAAAGATCATCCATTTAAAGAACAAATGAGAATGGCAGGAACAGACTGGCTGTCTGGATTTTTAAAACGACACCCACAACTAGCAATCAGAAAACCCGAAAGTACATCCGCTGCTAGAGCAGCTGGTTTCAATAAAGTTGTAGTAGcagacttttataaacttttaggaAAACTGTATGACAAACATAAATTTGCTGGTAACCGCATCTACAACTGTGATGAAACAGGTGTTTCAGTTGTTCCTAAAAGCAGATGCAAGATTCTACCTTTAAAAGGTCGCAAACAAGTCGGTGCACTAACGTCTGCTGAGAGGGGAGCAACTATAACCGTAGAGGTATGCTTTAGTGCCACTGGTCATTATTTACCTCCCATGATGATATTCCCGAGAAAGCGAATGAAACCGGAGTTGATGGTTAATGCACCTGAAGGAGCTTGGGGTGTATGTAGTGACTCGGGATGGATTACAACAGAACTTTTTTTTGGGTGGTTGAAAAAGTTTATTACGTATACCGGGGCCACAAAAGAAAATCTTGTGTTATTTCTAGTAGATGGTCATGCTACACATACTAAAAGCGTTGATGTTATCGACGAAGCTAGAGCGAATGGCATTGAGATTTTATCATTCCCACCACATACAACGCATCGACTTCAGCCCCTTGACGTCGCTTTTATGAAACCTCTAAGCACGTATTACGATCAAGCAGTAACATCATGGCTTCGTAGTAACCCAGGTCTTGTAGTTAGCACTCGCCAGGTGTCAAAATTGGTTGGTAAAGCGTTCATTCAATCAGCTACAATGTTGACAGGGTTTAAAAAATGTAGAATCTGGCCATACGACCCACAGGTATTTACAGAATCTGATTTCATAGCTTCTATGGCTACAGATATACCAGCCATTGAGAACTTGTCCGTAGCAGCTCAGCCCAATACAAATGAGACCGTTCAATCCAACCAACAAAACAGCCCCGATCAAGACAGCAATAAGGATAAGAACAAAATGCAAATAGACCCAGCAGATGATCCTCAACCAGGCTGTTCTTTCTGGCCGAAACAGCCATCACAACCAGTTCCGGAGACAGTATTCGCATTAGCCAGTCCAACGCAAGTTCTTCCAGTGCCAATAACTTCACAGAAAAAACGAGTATCTCGAGCACGAGGCAAGACAACAATAATTACTTCATCGCCGTACAAGCGAGAACTTGAGGATGCTATAAGACAGAAAAAAGAACTTGCTCAAGACAAAGAGAACAGAAAAATTGaaagacaaagaaagaaagatgaAAAACAAGTAAAGCGAAAACAAAGAAAGCAGTTGATAAAAGTCAAAACTAAAAAACTGAAATCTACCAAGAGGGTTGTTTTTTCATCGTCAGAGAGCGAGGATGAAATGGATAACACCCCATGTTTATATTGCAACGGTGGTTACTTTGAATCAATTGAGGGATGGATAATGTGTTTGATGTGTGGAAAATGGGCTCATTGTAGCTGCGCCGGTGTTGATGACGATGACCCTGAAGCGACTCACGTCTGCGCTTTATGCATACCTGACAAATAG
- Protein Sequence
- MVRTYKRKTDRAQWSEDNMKNAIKAVLEERMGTLLSSKTHGVPRTTLQRRVNFARKYPNIPQLMKVPLGPKTTVFTVAEENELATYIVDMESRLFGLTTRDVKILAYQLAIRNNKDHPFKEQMRMAGTDWLSGFLKRHPQLAIRKPESTSAARAAGFNKVVVADFYKLLGKLYDKHKFAGNRIYNCDETGVSVVPKSRCKILPLKGRKQVGALTSAERGATITVEVCFSATGHYLPPMMIFPRKRMKPELMVNAPEGAWGVCSDSGWITTELFFGWLKKFITYTGATKENLVLFLVDGHATHTKSVDVIDEARANGIEILSFPPHTTHRLQPLDVAFMKPLSTYYDQAVTSWLRSNPGLVVSTRQVSKLVGKAFIQSATMLTGFKKCRIWPYDPQVFTESDFIASMATDIPAIENLSVAAQPNTNETVQSNQQNSPDQDSNKDKNKMQIDPADDPQPGCSFWPKQPSQPVPETVFALASPTQVLPVPITSQKKRVSRARGKTTIITSSPYKRELEDAIRQKKELAQDKENRKIERQRKKDEKQVKRKQRKQLIKVKTKKLKSTKRVVFSSSESEDEMDNTPCLYCNGGYFESIEGWIMCLMCGKWAHCSCAGVDDDDPEATHVCALCIPDK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00067444;
- 90% Identity
- iTF_00067457; iTF_00067459; iTF_00067460; iTF_00067461; iTF_00067462; iTF_00067175; iTF_00066793; iTF_00067724; iTF_00067454; iTF_00067455; iTF_00067432; iTF_00067435; iTF_00067502; iTF_00067439; iTF_00067441; iTF_00067449; iTF_00067444; iTF_00067446; iTF_00067453;
- 80% Identity
- -