Asol129400.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720682.1:53930153-53933621[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.024 1.3 12.0 0.1 6 43 20 57 17 59 0.91 2 2 0.0099 0.53 13.2 0.0 1 37 699 735 699 736 0.93
Sequence Information
- Coding Sequence
- ATGCCACGTAATCGACCCAGAAAGAAAGCCCCACCATCTTACATAGTAGAAACAGTGAAAGCAGCGTGTGAAGCTGTTGCTACAAAACGGTTAACTTACCGTGAAGCTGAAAAGTTTTATAAAGTTAACAAAAGCGTCATTTACCAAAGACTTCGTGGCAGAAAAACAAGTTTAAACGTTGTGGGAGGTGGTCGACGTCCAGTTTTTTCCGAAGAAATTGAAAGTGAACTGGAAAACTGCATACTAGCACGAGTAGAATGGGGCTACCCTGTGGATAGGGAAGAATTACTAGATCTTGTAAAAGATTATGTTACAGCTAATAACCTAAAAACGCCATTTAAAAATGGAAGACCCGGTGAAGATTGGTACTTGAATTTTATGAAAAGAAGAAAGCTTCTTACTTTAAGAAAGCCCGAACAGTTACAACAAAAACGTGCAGATGCGGCTGATCCTTTTGTTGTAAAtgatttttacaataaattagaCAAGATAATTCGAAGAGAAGGCCTGCGCGAGTTGCCTGTACTTGTGCTGAATTGTGATGAAACTGGATTTGGAACAGATCCCAGCAAAGTTAAAGcaataggacaaaaaggaagcAAGAGCTTTTATCGAAGAGTGGCTGGTACTGGACGAGAAAATATTACTGTTAACTGCTGCGTTGCTGCTTCCGGCGTTGTTTTACCCCCGCATGTGATCTATAAAGCGAAAGGTGGTGTGCAGGTTCGATGGACCAGTCCCGAAAATGAGTATCCAGGTACTATTTATTCTACAACTGAAAACGGATACATGGAAGAGTCCGTTTTTTATTCTTGGTTTAATACACTCCTTATACCAAGTCATATAAGTTTCCGTGTTGTAAATGCTGCTCTTAAAGCTAATATTATACTATTAAAACTACCTAGTCATTTGACTCATCGTATGCAGCCTCTTGACAAGTGTGTTTTTGGTCCCCTTAAAATTGGATGGGAAAAAATTCTTGTAGCCCAAGGGCGTCGTGCTCTTTTGACGTCCCAAAATACGATCAACAGAAAAACATTTGTGGAACTTTTGGCAGAGGCGTGGAGAAAATATTTAACAGAAAGCAACATTATTTCTGGGTTTCGAGAAACTGGTTGCTTCCCAGTAGATGCATCTAAATTCCCTGAACAAGACTATGATCACATGAAGCTAGAACGCTTTAAAGCAGATCAAACAGAGAAAGATCAAACtctattaataaatgaaaatgctCATAATCAAATACTAGAAACATGCAATTTGCTAGAACAGGGAATTCCAGTTTCAGATACTCCCAACACAACTCAAGAAACTCCAACACCTCCACCTCCAACttcaattgaaaataaaataaatggggTGTCTGTTGAATCTGCAGTAGCTAATAATGATTCTGCAACTCAAGACATTTCAGAGCAGTTGCAGCAACCAACAACATCAGATGGGCGGCGTTCCATTATGGATATCTTTATCAATAAACTGAGAAGAGAATTTGCACCTCCAATTCCAAAATCCACTGAACGACAAATTAGATTAAAGAAAGATTCTTATGGTGAAGTTCTTACAAGTAAAGAAGTATTAATTCGTttaaaaaatgaagaaaataaaagaaattccaaaaaGAACAAGAAGTCTGCtccaacaaaaattaaaataccaccgaaaaaattatcagaaccaaaacataaaaagttaaaaaaatttgCAACTAATAAAAGCTCATCATCTGAATCAGAAAATGAAGAAATTCGAGAAGAAGTTGAAAATTTGCCATCAAGCGATGATGTTTCATTTGGTAAACTGTCAGATGAAGAAGACGAAAAAGAAAACTTAAGTCCAGATAACAATCTCTGTAACGaagtaaaaacaattaaatctGACAATTTTTATGCCGTTGACTTTGTATCAAAATGGTATATCGGAAAAGTATTGGAAATCCATGACCatcatataaaaatgaaatttttagaACGCATCACTAATCAGCAATTTCGTTGGCCAATACGAGAGGACATTGATACTGTTCACATTAGCGCTGTTTTTGTTCAGGTGACTTTGAGAGATGATGGGAATAATAAGCTGTCAGATAGAAATACGCCCGAACAGATACAAGCTGCCGTTTCTCTTGTTCTAAAGCGAGGATTATCAATTAGAAGTGTTGCAAAGGACACTGGAATTTCAAAAACTGCTTTGCAAAAGCATGTCTTAATAGCGAAACAAAATCCTAACGAAGAATACCGTGTAAATAAAAACATATGCAACAAACAGGAATGCATGCTACggaattacataaaaaattcttctaaaatgcAGTATGATCTTACCAAAGTAGTTGTTAGAAAAAGAGCCTACGAATATGTTAAAAAACCTAATATAAAGTATCCTGAAACATAG
- Protein Sequence
- MPRNRPRKKAPPSYIVETVKAACEAVATKRLTYREAEKFYKVNKSVIYQRLRGRKTSLNVVGGGRRPVFSEEIESELENCILARVEWGYPVDREELLDLVKDYVTANNLKTPFKNGRPGEDWYLNFMKRRKLLTLRKPEQLQQKRADAADPFVVNDFYNKLDKIIRREGLRELPVLVLNCDETGFGTDPSKVKAIGQKGSKSFYRRVAGTGRENITVNCCVAASGVVLPPHVIYKAKGGVQVRWTSPENEYPGTIYSTTENGYMEESVFYSWFNTLLIPSHISFRVVNAALKANIILLKLPSHLTHRMQPLDKCVFGPLKIGWEKILVAQGRRALLTSQNTINRKTFVELLAEAWRKYLTESNIISGFRETGCFPVDASKFPEQDYDHMKLERFKADQTEKDQTLLINENAHNQILETCNLLEQGIPVSDTPNTTQETPTPPPPTSIENKINGVSVESAVANNDSATQDISEQLQQPTTSDGRRSIMDIFINKLRREFAPPIPKSTERQIRLKKDSYGEVLTSKEVLIRLKNEENKRNSKKNKKSAPTKIKIPPKKLSEPKHKKLKKFATNKSSSSESENEEIREEVENLPSSDDVSFGKLSDEEDEKENLSPDNNLCNEVKTIKSDNFYAVDFVSKWYIGKVLEIHDHHIKMKFLERITNQQFRWPIREDIDTVHISAVFVQVTLRDDGNNKLSDRNTPEQIQAAVSLVLKRGLSIRSVAKDTGISKTALQKHVLIAKQNPNEEYRVNKNICNKQECMLRNYIKNSSKMQYDLTKVVVRKRAYEYVKKPNIKYPET
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -