Asol092013.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Amphimallon solstitiale
Gene Symbol
POL
Assembly
GCA_963170755.1
Location
OY720679.1:70247361-70262235[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.4e-06 7.3e-05 25.6 0.0 6 39 306 339 304 341 0.94

Sequence Information

Coding Sequence
ATGAAGGcagatgtaaataaatttgttgaaaaatgTGACGATTGTCAACGATACAAACATGGGATGCGCGCCCCAGAACCGATGACTATCACGTCAACAGCAACAAAAtcatttcaaaaagtatttttagatCTTGTGGGTCCAATCAACCAGGATTCTGatgataatagatacatattaacgcttcaatgcgagttaactaaatttgttgaggGATATCCTATTAAAGATAAGGAAGCCGAAACAGTAGCTAGATcatttgtgaataatttcattcttaggtATGGAGTTCCAGATGAAATAGTTACTGACAAAGGTACtgaatttttagcagcgatattcaaagaaacagccaacattttggaaattaaacaGTTAAATAGCACAGCTTATCATCACGAAACCTTGGGTGCATTGGAGAATACACATAAGCATTTGGGATCGTATCTTAGAATCCAAACGTCCAATTATCCGGACACATGGAGTTCTTGGGTACCTTTCTGGTGTTCTGCGTACAACACGAGCGAACACTCACAGACTAAGTACGCACCCTACGAACTAATGTTCGGCAAGAAATGTAAATTACCAAGTAACATACTAAAGTCAAACGAtccaatatataattttgagCATTATCCAAATGAATTGAAATATAGACTTTCAAGTGCTTGGAAAGATGCTAGAAATAACTTAATCGAAACAAAAGTCAAACGAACggaaaaatttaataaacgtGTAAGGAATGTAACTTACAAATGCAATGATCAAGTTTTAGTCAAAAATGAAACTACAAACAAGTTACAACCTCTATATAAGGGTCCTTACGCAGTAATAAGGGGAAACACACCGAATGTAAcgaTGGTTCGCACTTACAAAACAAAGAAACCCGTGCCAGGGTGGACCACACGAGATGTTGAAGCGGCTATCAATGCTGTACGTGGAAAATCAATGCCCGCTACGAAAGCAGCAAAGCAATTTGGCATTCCGAAAACGTGCCTTTTGAGACGCCTCAAACTTAATAAAATTGCCCCTCCTCGAAACGACAACTTTAAGAATGTTTTCGACAAAGATCAAGAACAGCAGCTTGTTGAACATATTCTTGATTTGGAAGCTAGATTTTATGGTCTAACTCCAATGGAAATCAGAAAACTTGCTTTTCAAGTCGCAGAAACTATGAAGATCAACCATCCTTTCAACAATGAGAAGAAGATTGCTGGCCTAGACTGGCTGTACAATTTCAGGAAGAGGCACCCAAACTTATCATTGAGAAAGCCAGAGCAAACCAGCGTTGCTAGAGCGGCTGGATTCAATAAGGTTCAAGTGACAAAATTTTTCGATGTACTTTCCTTGGTAATGCAAAAACACAACTTTAAATCAGACCAAATCTACAATGCAGACGAGACTGGCATGAATACCGTACCTACTCCTCGAAAAATTATCGCGCAAAAGGGCCGAAAGCAAGTGGGTTGCATCGTCAGCAGTGAAAGAGGTTTTAATGTGACAGTAACATGTGCAATATCGGCATCAGGCTCGTACGTTCCACCCTTCGTCTTTTTTCCCAGAAAACGGATGTCTGATCTATTGATGAAAGGTTGTCCAGCTGCAGCTGTGGGACATGCGAATGGTAGTGGTTGGATGGACACTGAACATTTTCTGAAATACTTGGAACACTTCGCAAAACACACAAATGCATCTGAAAACCGAAAAGTATTGCTAATCCTCGACAACCATGCCAGTCACCGCAATCTTGAAGTTATCACAAAGGCTCGTAGTTTGAACATTGTGATGATATCACTGCCACCTCATACAAGTCATCGGATGCAGCCGCTCGACTGTTGTTTTTACGGTCCGTTGAAATGTCAGAATGCTAGAGAATGTGACAAATGGATGACCAATCACCCGGCTCAAAGAATAACCATATACAACGTCATGGATCTGTTTGGCAAAGCATTTTTACATGTTGCCACGCTCGAAAAAGCCGTCAGGGGTTTCGAAGTGACTGGAATCCATCCCTTCAATCCAGACATCTTTTCGGAAACAGATTTTCTTCCATCGACAGTCACTGAAATTGCTACACCGTTAGCGGATGATGAAGACGACGAATTGGAGGAGTATGAAGCAGAATCTGTAGGTAACATTCGTGATCATGAAGAGGACAGAACGAAATCAATCTCAGCTCCATCAACTGCTAGGGATCAAAATGAAAGCGTAAGAAGCGAGGGACATGAAAAAATACCATTGCAACAAAATGTTGACACATCTCGCAACACCGCAGAGCCAATAGCTGGGCCATCAAGTGCGAAAGATCTGTACGATGATGATATTCAAATTGTTCTGTCTGTGATTTCGCCCAAACCAAAGTGCACAGTCCGGAAATCGGATACTAGACGAAAAGCCCAAGCAGCTGAAGAATTGACCGGTACCCCCTTTAAAGATTCTTTGGCAGCTGAAGCATTGGAGAAGCAGAAAAAGGCACCGACAAAGTATAAACAAGTGAAGAGAAAATGTTTTTCACAAAGTTCTTCAAAATGTGAGGCTCCAAAGAAGAAGTTAAAGAAAGGAAAGAAACTTCTGACAAAACGCTGTCGCTGA
Protein Sequence
MKADVNKFVEKCDDCQRYKHGMRAPEPMTITSTATKSFQKVFLDLVGPINQDSDDNRYILTLQCELTKFVEGYPIKDKEAETVARSFVNNFILRYGVPDEIVTDKGTEFLAAIFKETANILEIKQLNSTAYHHETLGALENTHKHLGSYLRIQTSNYPDTWSSWVPFWCSAYNTSEHSQTKYAPYELMFGKKCKLPSNILKSNDPIYNFEHYPNELKYRLSSAWKDARNNLIETKVKRTEKFNKRVRNVTYKCNDQVLVKNETTNKLQPLYKGPYAVIRGNTPNVTMVRTYKTKKPVPGWTTRDVEAAINAVRGKSMPATKAAKQFGIPKTCLLRRLKLNKIAPPRNDNFKNVFDKDQEQQLVEHILDLEARFYGLTPMEIRKLAFQVAETMKINHPFNNEKKIAGLDWLYNFRKRHPNLSLRKPEQTSVARAAGFNKVQVTKFFDVLSLVMQKHNFKSDQIYNADETGMNTVPTPRKIIAQKGRKQVGCIVSSERGFNVTVTCAISASGSYVPPFVFFPRKRMSDLLMKGCPAAAVGHANGSGWMDTEHFLKYLEHFAKHTNASENRKVLLILDNHASHRNLEVITKARSLNIVMISLPPHTSHRMQPLDCCFYGPLKCQNARECDKWMTNHPAQRITIYNVMDLFGKAFLHVATLEKAVRGFEVTGIHPFNPDIFSETDFLPSTVTEIATPLADDEDDELEEYEAESVGNIRDHEEDRTKSISAPSTARDQNESVRSEGHEKIPLQQNVDTSRNTAEPIAGPSSAKDLYDDDIQIVLSVISPKPKCTVRKSDTRRKAQAAEELTGTPFKDSLAAEALEKQKKAPTKYKQVKRKCFSQSSSKCEAPKKKLKKGKKLLTKRCR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-