Asol025871.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- clz9
- Assembly
- GCA_963170755.1
- Location
- OY720675.1:248213808-248215295[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.4e-07 3.4e-05 26.6 0.0 3 39 18 54 17 58 0.96
Sequence Information
- Coding Sequence
- ATGGTGCGTAACTATATAAGAAAATCCGCAAGAgctacaaattattttaaagaagACCTACAAGAGGCACTGAGAGAAGTTACCGCGGGAAGACTAACAGCCTTTGCAGCGTCGAAACGTTATAATATTCCCACCAGCACAATTCACAACCACAAGAGAGGGGATAGAGGTCTAATTAGTAAAACTCAAGGACGAAGTACTATCCTTCCCATCAACGATGAAGTGAAACTGGCCGAAAGTCTAAAGTGTATGGAAAAATGGGGCTTTGGTCTTACAAGGAAGGAAGTTTTGAATTTGGTGCAACAATTTGTGATGAGAAACCGTTTGAAAACTGTTTTTACCAATGGCCGCCCTGGAGAAGACTGgtttttgaattttaaacgaagacATGGTTTATCATTAAAAAAACCTCAAGCCGTCGAATATGCGCGCAAAAAAGCCGTTGATCCCTTCCCGATAAACGATTACTTCGATTTGTTGGAACAAGTAATTAATGAACACAGCTTTGGCGACAAGCCACATCTAATTTATAACTTAGATGAATCCAGTTTCTGTCTGGACCCTACAAAGTCCAAAATTGTAGGCAAAATTAATGCACCCGCCTCCCGTACAACCAGCGGACCAGGCAAAGAAAATGTAACGGTGCTTGTAGCGGGAAGCGCTTCAGGCCATAAACTACCTTCAATGATTATTTTTAAGGCGAAATACCTATGGGATGAATGGTTAGCTGCAGAAGACAAAGCCTTCCCAAAAACAGCCTATGCGGCAACGAAAAATGGATGGATGGAGGCGGATGTTTTCCTTCGCTACATGGAGAAAACATTTATCCCAAATGTACCGAATGAGAGACCCATATTATTAATTTATGACGGCCATTCCACCCATATTGATGAACGCACAATACAACTTGCCATTGATAATGATATTATTATCCTCAAATTACCGCCTCATTCCAGTCATTTGCTCCAGCCGCTTGACCTGGCTGTGTTTAAACCGTTAAAAGATGCCTGGGATGCGAAACTTGTTGCTTGGCAAAGAAGGCATGTAGGacaaaaattgtcaaaaaaaatgttttcacaatTCATTGGCGAAATATGGCTAGAATCAAATGAAGCCAACATAATTAATGGATTCCGACAGGGGGACATTCATCCATTCAATCGTCATGTTGTTAGTCGTGAAAAATATGACCCTGAAGCTTTGCGTAGATGGGAAACTAGGCAAAACGTTCCTGACATAGCTATCCCCGACGCTATCCCATCTACGTCTGGAATATTACAAAATGATCATGAAAACCTGCATAATGATCAACAGCCAGGCACTTCGTTTGAAGATTTAATGCTCCAAGAAATCAAACAGAAAAATCGGGAAGAAAAGAAACGAAAAAAGAGGGTAGCTGCTGGAGCCGAGGTAATAACTACACTCGAAGTAATGGAAAGATTATCGGTAAACAAGGAAAAGAAAAGCGATAACCCTAAAAAAAACTAA
- Protein Sequence
- MVRNYIRKSARATNYFKEDLQEALREVTAGRLTAFAASKRYNIPTSTIHNHKRGDRGLISKTQGRSTILPINDEVKLAESLKCMEKWGFGLTRKEVLNLVQQFVMRNRLKTVFTNGRPGEDWFLNFKRRHGLSLKKPQAVEYARKKAVDPFPINDYFDLLEQVINEHSFGDKPHLIYNLDESSFCLDPTKSKIVGKINAPASRTTSGPGKENVTVLVAGSASGHKLPSMIIFKAKYLWDEWLAAEDKAFPKTAYAATKNGWMEADVFLRYMEKTFIPNVPNERPILLIYDGHSTHIDERTIQLAIDNDIIILKLPPHSSHLLQPLDLAVFKPLKDAWDAKLVAWQRRHVGQKLSKKMFSQFIGEIWLESNEANIINGFRQGDIHPFNRHVVSREKYDPEALRRWETRQNVPDIAIPDAIPSTSGILQNDHENLHNDQQPGTSFEDLMLQEIKQKNREEKKRKKRVAAGAEVITTLEVMERLSVNKEKKSDNPKKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- iTF_00067391; iTF_00067422; iTF_00067392; iTF_00067430; iTF_00067434; iTF_00067448; iTF_00067418;
- 80% Identity
- -