Asol148315.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- clz9
- Assembly
- GCA_963170755.1
- Location
- OY720684.1:6056627-6058427[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.1e-07 2.8e-05 26.9 0.0 1 38 18 55 18 57 0.93
Sequence Information
- Coding Sequence
- ATGgtaagaaaatacaaaaagaaacttggagcgaggaattataaaaattatgaccCAGAAAATGTAGAAAAAGCTCTCGAGAAAGTTATAGACCATCGATGGAGTCTGCGAAAGGCTGCTAAAATATATAAAGTCCCATATGGCACCCTAAATAATAGATATCATGGACTGCGTATTAACAAAAATGGTGGCCAGTCGGTgttttctaaaaatgaagaaatgtcttttattttgtCTATCACTATTTGTGGAGACTGGGGGTTTCCCTTGACTATTATGGACATTAGGCAACTTGCAAAAAATTATCTAGATAGCCAGGGCCGCACTGTGGAAAAATTTGATCATAATTTGCCGGGTAGAGATTGGGCATATTCTCTGTTGCACAGGTATAAAAACATAGTATCCCATAAATTAGCAGCAAATATTAAACGAACTCGTGCTGATGTGTCAAGAGAAATTATAGTTGAATATTTCGAAAATCTGAAAGTAACATTAGAGGGAATTCCAGCATCAAATATATTCAACTATGATGAAACCAATTTGCAAGACAATCCGGGACAAAACAAAATGCTGTTCCGTAGAGGAACTAAATACCCAGAACGCATTTGTAACTTCACTAAAAGTGCAACATCAATTATGATATGCGGTTCCGCTTCGGGAGTGCTCTTGCCGCCTTACGGCTACCATGCTGTGATGCAAGGTGCTGCTCAACAGGTTCCCGTTATACCCGGACGCATCACGGTTGGATGGTTGCCCAAAAGTTTTGGAGATTGGTTTATTTCTTCCTATCTACCGCATGCCAAGAGACTGGAAGGGCGAAAAGTTTTATTAGGCGACAATTTATCGTCTCACTTCACGAATGAGGTACTAAAGCTATGTGCAGAAAATAATATATCATTTGTTTGTCTCCCGAAGAATTCCACTCAACTAACGCAACCCTTGGATGTTGGATTTTTTCGGCCATTCAAAATTGCTTGGAGGGCTGTTTTGACTAGATGGAAAGCTACAAATAAACTTGCGGCATCTATTGATAAGAAGGACTTTCCATACTTACTAAATGCGACATTgctagaaatgaataagaagttcgTTGATGGTGCTATACAAAAGGATTTGATATCGTCCTTTAAAGCAGCTGGAATAACACCGTTAAATCCAGACGCCGTTTTGAAAAAAATTCCGTCAGAGAACACCAACGGTGTTGCCAATGAAGTCAATAATGTTTTGGTTGCTTATTTGCAAGGACAAAGGTTTACAGCCATGCCATCCAGACGCAATATTAAACGACAAAAACTTATCGTTGTACCAGGCAAAAGTGTGATTGCACCTGATGAAGACTCAGATAGCGAAATCAGCGCACCCGAATCATTGACCAATGATAATGATAATTCAGATGACGAGCCAATGGAAGATATTCAGGAAGAAGAAGTAGAGTATATAACACCAGAGAAGAATAAAATCACGAAGGGAAACTTTGTGTTGGTAAAAGTATTGGGTGGTTCAAGGAAGAAAACAATCTATAGATACGTTGCAATAGTCCAAGGTGTGGCAGGTGACGGTGATATCGAACTGTTAGGAATGAAGTCTGTAGACAAACAAAGAAACATTTTCAAAAGAATTGAAAGCGACGAATTTACAGCTGAATTTTCAGATATAATAGCTCGGCTTCCGAATCCCAAATTGAAAGCTTTTGGTCAGCAAGAGGCATACTATTTTGATCATGTAATcgatattaaagaaatatag
- Protein Sequence
- MVRKYKKKLGARNYKNYDPENVEKALEKVIDHRWSLRKAAKIYKVPYGTLNNRYHGLRINKNGGQSVFSKNEEMSFILSITICGDWGFPLTIMDIRQLAKNYLDSQGRTVEKFDHNLPGRDWAYSLLHRYKNIVSHKLAANIKRTRADVSREIIVEYFENLKVTLEGIPASNIFNYDETNLQDNPGQNKMLFRRGTKYPERICNFTKSATSIMICGSASGVLLPPYGYHAVMQGAAQQVPVIPGRITVGWLPKSFGDWFISSYLPHAKRLEGRKVLLGDNLSSHFTNEVLKLCAENNISFVCLPKNSTQLTQPLDVGFFRPFKIAWRAVLTRWKATNKLAASIDKKDFPYLLNATLLEMNKKFVDGAIQKDLISSFKAAGITPLNPDAVLKKIPSENTNGVANEVNNVLVAYLQGQRFTAMPSRRNIKRQKLIVVPGKSVIAPDEDSDSEISAPESLTNDNDNSDDEPMEDIQEEEVEYITPEKNKITKGNFVLVKVLGGSRKKTIYRYVAIVQGVAGDGDIELLGMKSVDKQRNIFKRIESDEFTAEFSDIIARLPNPKLKAFGQQEAYYFDHVIDIKEI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00067299; iTF_00067270; iTF_00067302; iTF_00067177; iTF_00067563; iTF_00066831; iTF_00067375; iTF_00067283; iTF_00067161; iTF_00067289; iTF_00067291; iTF_00067292; iTF_00067452; iTF_00067293; iTF_00067294; iTF_00067296; iTF_00067282; iTF_00067288;
- 90% Identity
- iTF_00067282;
- 80% Identity
- -