Asol082707.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- TIGD6
- Assembly
- GCA_963170755.1
- Location
- OY720678.1:120870884-120872839[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.8e-07 5.3e-05 26.0 0.0 6 39 20 53 18 55 0.94
Sequence Information
- Coding Sequence
- aTGGTTCTCACTtacaaaaaaaagaaaccagTGCCAGAGTGGACCACACGAGATGTTGAAGCGGCTATCAATGCTGTACGTGGAAAATCAATGCCCGCTACGAAAGCAGCAAAGCAATTTGGCATTCCGAAAACGTGCCTTTTGAGACGCCTCAAACTTAATAAAATTGCCCCTCCTCGAAACGACAACTTTAAGAATGTTTTCGACAAAGATCAAGAACAGCAGCTTGTTGAACATATTCTTGATTTGGAAGCTAGATTTTATGGTCTAACTCCAATGGAAATCAGAAAACTTGCTTTTCAAGTCGCAGAAACTATGAAGATCAACCATCCTTTCAACAATGAGAAGAAGATTGCTGGCTTAGACTGGCTGTACAACTTCAGGAAGAGGCACCCAAACTTATCATTGAGAAAGCCAGAGCAAACCAGCGTTGCTAGAGCGGCTGGATTCAATAAGGTTCAAGTGACAAAATTTTTCGATGTACTTTCCTTGGTGATGCAAAAACACAACTTTAAACCAGACCAAATCTACAATGCAGACGAGACTGGCATGAATACCGTACCTACTCCTCGAAAAATTATCGCGCAAAAGGGCCGAAAGCAAGTGGGTCGCATCGTCAGCAGTGAAAGAGGTTTTACTGTGACAGTAACATGTGCAATATCGGCATCAGGCTCGTACGTTCCACCCTTCGTCCTTTTTCCCAGAAAACGGATGTCTGATCTATTGATGAAAGGTTGTCCAGCTGCAGCTGTGGGACATGCGAATGGTAGTGGTTGGATGGACACTGAACATTTTCTGAAATACTTGGAACACTTCGCAAAACACACAAATGGATCTGAAAACCGAAAAGTATTGCTAATCCTCGACAACCATGCCAGTCACCGCAATCTTGAAGTTATCACAAAGGCTCGTAGTTTGAACATTGTGATGATATCACTGCCACCTCATACAAGTCATCGGATGCAGCCGCTCGAATGTTGTTTTTACGGTCCGTTGAAATGTCAGTATGCTAGAGAATGTGACAAATGGATGACCAATCACCCGGCTCAAAGAATAACCATATACAACGTCATGGATCTGTTTGGCAAAGCATTTTTACATGTTGCCACGCTCGAAAAAGCCGTCAGGGGTTCCGAAGTGACTGAAATCCATCCCTTCAATCCAGACATCTTTTCGGAAACAGATTTTCTTCCATCGACAGTTACTGAAATTGCTACACCGTTAGCGGATGATGAAGACGACGAATTGGAGGAGTATGAAGCAGAATCTGTAGGTAACATTCATGATCACGAAGAGGACAGAGCGAAAGCAATCTCAGCTCCATCAACTGCTAGGGATCAAAATGAAAGCGTAAGAAGCGAGGGACATGAAAAAATTCCATTGCAACAAAATGTTGACACATCTCGCAACACCGCAGAGCCAATAGCTGGGCCATCAAGTGCGAAAGATCTGTACGATGATGATATTCAAAACGTTCTGTCTGTGATTTCGCCCAAAGGAAAGTGCACAGTCCGGAAATCGGATACTAGACGAAAAGCCCAAGCAGCTGAAGAATTGACCGGTACCCCCTTTAAAGATTCTTTGGCAGCTGAAGCATTGGAGAAGCAGAAAAAGGCATCGACAAAGTATAAACAAGTGAAGAGAAAATGTTTTTCACAAAGTTCTTCAAAATGTGAGGCTCCAAAGAAGAAGTTAAAGAAAGGAAAGAAACTTCTGACAAAACGAAGAGTCGCTGATGATGATTCAAGCGATCCAGATGAAGGCAGCAATCCACAATGCATCTATTGTGTGGGGAAGTTCCTGAAGTTTAAATCGAACGAAGGGTGGATCCAATGTCAACAGTGTGGTAAGTGGGCCCACGAAACGTGTGCAGGGGCCTCAGAAGGTGATGACAATTTCCTGTGCATCAAATGTGAAGGTGACAGCGATGAGGCTGAAAATTTATATTACAAGTGA
- Protein Sequence
- MVLTYKKKKPVPEWTTRDVEAAINAVRGKSMPATKAAKQFGIPKTCLLRRLKLNKIAPPRNDNFKNVFDKDQEQQLVEHILDLEARFYGLTPMEIRKLAFQVAETMKINHPFNNEKKIAGLDWLYNFRKRHPNLSLRKPEQTSVARAAGFNKVQVTKFFDVLSLVMQKHNFKPDQIYNADETGMNTVPTPRKIIAQKGRKQVGRIVSSERGFTVTVTCAISASGSYVPPFVLFPRKRMSDLLMKGCPAAAVGHANGSGWMDTEHFLKYLEHFAKHTNGSENRKVLLILDNHASHRNLEVITKARSLNIVMISLPPHTSHRMQPLECCFYGPLKCQYARECDKWMTNHPAQRITIYNVMDLFGKAFLHVATLEKAVRGSEVTEIHPFNPDIFSETDFLPSTVTEIATPLADDEDDELEEYEAESVGNIHDHEEDRAKAISAPSTARDQNESVRSEGHEKIPLQQNVDTSRNTAEPIAGPSSAKDLYDDDIQNVLSVISPKGKCTVRKSDTRRKAQAAEELTGTPFKDSLAAEALEKQKKASTKYKQVKRKCFSQSSSKCEAPKKKLKKGKKLLTKRRVADDDSSDPDEGSNPQCIYCVGKFLKFKSNEGWIQCQQCGKWAHETCAGASEGDDNFLCIKCEGDSDEAENLYYK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00067661;
- 90% Identity
- iTF_00067236; iTF_00067268; iTF_00067661; iTF_00067343; iTF_00067259; iTF_00067463; iTF_00067477; iTF_00067305; iTF_00067295;
- 80% Identity
- -