Asol067170.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720677.1:125303055-125304942[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-06 0.00012 24.9 0.0 2 39 11 48 10 54 0.94
Sequence Information
- Coding Sequence
- ATGACGAAGATAATTTACAATACGTGGAAGCAGGAAGACATGGACGAAGCTTTACTAAAACATCGGAATGGCGAAATTGGATTTAATGAAGTATGTAGGAGATACAAGATACCAAAGCCTACATTTCGACGTCATTTGAAGggtttaaataaaacaacaaaatttggaatacctAATGATTTGACAACAGAAATGGAAGATGAATTAGCACAACATATAATTAATCTAGAGCGACTTGCATACCAACTTGCTGAGAAGTATCATGTACCTCATCGTTTCAACAACGAGAAGAAAATAGCTGGTAAAAAATGGTTTTACCGCTTTATGAAAGAGCATCCCACTTTGTCGTTGAGAGTCCCCGAAGCAACTTCCATGGCCAGAAGTAAAGGGTTTAATAAAGAGCGCGTTAATGATTTCTTTGATAAATATGAGAAAATACTAGATGAACAGAAGTTTACTGCTGACCAAATATACAATGTCGATGAGACAGCATTATCCACGGTTCACAAACCTTCTAAAGTAATTGCCCAAAAAGGCAAACATCAAGTAGGCGCAATCACCAGCGGAGAAAGGGGTCTTACAACGACATGTGTATGTGCAATGAGTGCAGCAGGCGAATTTATTCCGCCAATGTTGATATTTAAGCGCGGCAGAATGAATGACATCCTAAAAAAAGGAGCTCCACCAAACACGGCATTTGGATGCTCTAAAAATGGATGGATAACATCCGAACTGTTTGTCCAATGGCtagaacattttataaaatacacaaaattagaAAAAAGGAACCAGAAACAAATTTTGCTTTTACTAGATGGACACAGCACACACACAAAAAATTTAGAAGCAATTCAGCTTGCTCGTGATTATGGTATAATCATGCTATCCTTTCCTGCTCACACGACACATCGTCTGCAGCCATTGGATAGATCGTTCTTTAAATCACTAAAAAACAGCTACAATGAAGCGGCATCTTGTTGGCTACGTTCAAATCCTGGCAACGTTATAAAACAAGCTAACATTGCGGAACTCCTTGGTAGTGCATACCCCAGATCAGTTCGTATGGACATAGCACTAAATGGTTTTAAGGCAACAGGTTTGTGGCCATGTGATAGAAATGTCATCAAAGACGAGGACTTTGTAGCTGCTGTGCACATTGTTGAGCAACCAGACCAAGAGTCTGCTAATTCTGATACAAATGAAGCAACAGAGCAACCCAGAAATACATTTCTATCTACTAAAGTTACATCGCCACCTAGAGTTGCAACCCCACCATTAAGTGTATCACCTCCTATAGTCGTGACGCCACCGCCAAACATTGAATTGCTGCCTAATATTGGAACACCACTAAGTGTTTTACCTGGACCTTCGACGAGTTCTCAAGAATCTGTACCCGAAAACAATAGTGAAACGGTTAATGTAATTAATCGTCAACAAATAAAATCTGATTTGCACACTTTATCTCCTATCCCTCGTATGACGATAGTTATAAACAAAATGAAGAAGGGAACGAAACCAACAATGGAACTCACTTCAAGTCCTTATAAAAACGAAATGATAGCCAAAGAAaccacaaataaaaaaaagaagccTACGCAGGATTTAAACAAAGGCAAAGTAGAAAAAGTGAAGAAGCAAACTGTGAAAAAAAGAAAGATTGATGAACAGTttaagaagaataaaaaaattaaagataaaggCAATTGGTTCTGTCAACTATGCAAAGAAAACAGCGAAGAAAATATGATTCAGTGCATGGAATGCAAAGGGTGGATACATGACTTATGTGCTGGCGTGGAGAGTaacattaagaaatatatttgtgatatttgtgttcaaaaaaactaa
- Protein Sequence
- MTKIIYNTWKQEDMDEALLKHRNGEIGFNEVCRRYKIPKPTFRRHLKGLNKTTKFGIPNDLTTEMEDELAQHIINLERLAYQLAEKYHVPHRFNNEKKIAGKKWFYRFMKEHPTLSLRVPEATSMARSKGFNKERVNDFFDKYEKILDEQKFTADQIYNVDETALSTVHKPSKVIAQKGKHQVGAITSGERGLTTTCVCAMSAAGEFIPPMLIFKRGRMNDILKKGAPPNTAFGCSKNGWITSELFVQWLEHFIKYTKLEKRNQKQILLLLDGHSTHTKNLEAIQLARDYGIIMLSFPAHTTHRLQPLDRSFFKSLKNSYNEAASCWLRSNPGNVIKQANIAELLGSAYPRSVRMDIALNGFKATGLWPCDRNVIKDEDFVAAVHIVEQPDQESANSDTNEATEQPRNTFLSTKVTSPPRVATPPLSVSPPIVVTPPPNIELLPNIGTPLSVLPGPSTSSQESVPENNSETVNVINRQQIKSDLHTLSPIPRMTIVINKMKKGTKPTMELTSSPYKNEMIAKETTNKKKKPTQDLNKGKVEKVKKQTVKKRKIDEQFKKNKKIKDKGNWFCQLCKENSEENMIQCMECKGWIHDLCAGVESNIKKYICDICVQKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00067241; iTF_00067212; iTF_00067458; iTF_00067362; iTF_00067364; iTF_00067269; iTF_00067365; iTF_00067366; iTF_00067367; iTF_00067495; iTF_00067368; iTF_00067372; iTF_00067409; iTF_00067389; iTF_00067585; iTF_00067339; iTF_00067309; iTF_00067408; iTF_00067355;
- 90% Identity
- iTF_00067458;
- 80% Identity
- -