Asol037453.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720676.1:106540412-106542141[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.5e-07 1.9e-05 27.5 0.0 1 40 18 57 18 61 0.91
Sequence Information
- Coding Sequence
- ATGGTTCGAAATTATAAGAGATGCCCCGGTTCAAGACACTATGGCAATTACACCCCTGACACGTTACAGGCATGCTTACAAGCAGTTCGTTCCCATCAAATGACTCAGCGTGAAGCAGAAGAAAATTTTGGTATTTCTAGATCgacaatcaaaaataaattaaaaggaaATCATGGAAAAAAGGTCGGTCGCTCCCGCGTATTTACAGAGGCTGaagaaacagcttttgaacaaCATTTGATCAAATTAGCAGATTATGGATTCCCTGTAGATCACTCCGATTTTCGTATGGCGGTCAAAAGCTACTTGGACAAAAAAGGCGTAAGAGTTCCTTTATTTAAAGACAACCTACCTGGGTATGAGTGGACACGATCCTTTTTACAACGGCATCACAATTTATCTGTCCGAATGAGTGCAAATATTAAAAAGGCTCGAGCACATGTTAGTGCAACTGATATTGAATCTTACATGGAGAACCTGAAGGTTGCCATACAAGACATTCCACCTTCTAGAATCTGGAATTACGATGAGACCAACCTAAGCGATGATCCTGGCAACAAAAAGCAAGAGTTCCACGTCGGTGATTTTTGTGGCAATGCCAGTGGCAAATGTCTTGCACCTTACGTTGTCTACAAAGCCGACCACATTTGGTCGACTTGGATGGAAAACGGCCCTGAACATGCGCGGTATAACCGTTCGAAAAGTGGATGGTTTGATGGAACTTGTTTTGAAGATTGGTTTGAGTTGCAGTTTCTGTCAGAAGTTAGACATGAAGATGGGCCCGTACTGTTAATTGGTGACAACCTTTCTTCTCATATCAACAGTCGAGTTCTTCAGCTATGTGAACAACATAATATAAGATTTGTATGTTTACCGCCCAACACAACCCACATATCGCAACCTTTAGATGTAGCCTTTTTTGCCCCTATGAAACGATTGTGGCGGGGAATTCTAACTAAATGGAAAGAATCTAAAGCAGGCTCCAAGTACCCAACCGTTCCCAAAGATTTATTCCCAACATTATTGAAGAAATTGATGAACAGCTTAGCGGAAAACAAGACGCAAAATCTGATTTCTGGATTTAGAAAATGTGGAATCTGTCCTCTAAACAAACAAATGTTACTTGACCGTCTACCAGAAAAACTAACAGACGTTGACAAAAATACTGTAGGCGAGGCTTTTTTGGAACAATTAGACAAAAAACGAGCAGATTATGTTGGCACTTGCAATCCGAAGAAAAGGAGGAAGAAACTGCAGGTTCCTGCAGGAAAAAGCATTTCTGCTGCTGATCTGGAAGCAGCAAGAAATACTCCTGCGCCTTCAAAATCCAAACCTACAAAAACCTATCTACAGAAACAACAACTTGATGACTTAAGTTCCTCTGATGAAGACTCTGATGTGCCCTTAGAATCAGATACAGTCAGCGAAACATTTTCCGACCTAGAAGAGGAAATATCAACTACCTTGAACACTTACGCCAACCTACCAAAGTTAACACCTGCAGACATTGCAGTTGAAGATTttgtgattgttttgtttaatggGGACAAATATCCTGGGAAAATTGTTAAGATTTCTCAAGCAGGACCCACCGTTGATTGTATGGAAAGACGATTAAAGTGTTGGCGGTGGCCAGAAAGAAAGGACGTAGAGATTTATAACTGGGAAGACGTCTTATGA
- Protein Sequence
- MVRNYKRCPGSRHYGNYTPDTLQACLQAVRSHQMTQREAEENFGISRSTIKNKLKGNHGKKVGRSRVFTEAEETAFEQHLIKLADYGFPVDHSDFRMAVKSYLDKKGVRVPLFKDNLPGYEWTRSFLQRHHNLSVRMSANIKKARAHVSATDIESYMENLKVAIQDIPPSRIWNYDETNLSDDPGNKKQEFHVGDFCGNASGKCLAPYVVYKADHIWSTWMENGPEHARYNRSKSGWFDGTCFEDWFELQFLSEVRHEDGPVLLIGDNLSSHINSRVLQLCEQHNIRFVCLPPNTTHISQPLDVAFFAPMKRLWRGILTKWKESKAGSKYPTVPKDLFPTLLKKLMNSLAENKTQNLISGFRKCGICPLNKQMLLDRLPEKLTDVDKNTVGEAFLEQLDKKRADYVGTCNPKKRRKKLQVPAGKSISAADLEAARNTPAPSKSKPTKTYLQKQQLDDLSSSDEDSDVPLESDTVSETFSDLEEEISTTLNTYANLPKLTPADIAVEDFVIVLFNGDKYPGKIVKISQAGPTVDCMERRLKCWRWPERKDVEIYNWEDVL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00067110;
- 90% Identity
- iTF_00067174; iTF_00067246; iTF_00067183; iTF_00067187; iTF_00067220; iTF_00067190; iTF_00067224; iTF_00066842; iTF_00067226; iTF_00067227; iTF_00067229; iTF_00067230; iTF_00067135; iTF_00067199; iTF_00067254; iTF_00067207; iTF_00067026; iTF_00067221; iTF_00067232;
- 80% Identity
- -