Asol075655.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720678.1:40201603-40210389[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-07 1.4e-05 27.9 0.1 2 37 16 51 15 59 0.90
Sequence Information
- Coding Sequence
- ATGGTGTCTAACTACCAAAGAAAATCTAATGGGCAAACATGGTCAGAAGCTGATATGAGTAACGCTATAAAGGCGATACAGGAGAAACGCATGGGTTGGCTTAAAGCATCAAAGTACTTCAATGTACCTCAGGCAACTTTGAGACGTAGaactactaataaaaataaatatgcaacTGGTACCAATAAAATAATGGGAACCAAGACTTCATTGCCCATTGAAGCCGAAAACGAAGTCGTCGAACATATTCTTCAATTAGAATCTAGACTCTTCGGTGTAACAGCAACAGAACTTCGAAAATTAGCTTATGACTTAGCAGTGAGAAAAAAATATCCTCATAAATTTAATAGTACAACAAAATGCGCTGGATGGGACTGGTTAAAAGGCTTTCGTTCAAGACATCCAGAAATATCACTCAGAACACCAGAACCGACTTCAGCAGCGAGAGCAAGAGGCTTCAATAGACCACAAGTGCAAAAATTTTTTAGACTGATTAGTGAAACAATGGAGACTGAAAATATACCAAATAGTAGAATATACAATATGGATGAATCGGCCCTTACCACCGTGCATAAACCTCCTAAAGTTTTTGCGAAAAAGGGGAAAAAACAAGTAGGGTCAATAACGAGCGGAGAAAGAGGGCAACACGTTACGCTTGTAGCTTGCATGAACTCTGCGGGTAGATATATTCCTCCTGCGCTAATTTTCCCCAGAAAAAACTATAAGGCAGAATACTTTGATGGATCACCACCTGATACGCTTGGCCTGTGTTACGAAACTGGCTATATGGTATCAGAACTTTTTGTTAAATGGTTGGATCATTTTATCAAACACGTAAAACCGACTAGAGAAGAAAAAGTGATTCTCATTCTAGATGGCCATGGAAGTCATAAATCTTTGGATGCTTTATTGAAAGCAAAACAAAATGGTATTATTCTTATTtgcttaccaccccactctactCATCGACTTCAGCCGTTAGATGTAGCCTTTTTTGGCCCACTAGAAATTTTTTACAATTCCGAGTCCGCCTTGTGGATGAAAAATAACCCCGGCAGAACCATAAGCTTATATCAAATCAGCACATTATTTTGTTCAGCTTATACCAAAGCAGCTACCATGGGAAATGCCATAAGTGGATTTAAAAATACCGGAATTGTTCCATTAAATCCAGATATATTCCCAGATCATTTGTATGCACCCTGTGAAGTAACTGACAATGAAAAATGGTTCGAAAACCAGACAACCGAACAAAGTGAAATACAAAATATGGATTCTCAGCCTGAGGAAGAAAATGTTCAGGATATAAATGTAGACCTTCAATCGGCTTCAACATCCGAAGAAAATGTTATAGAAAATGGCTTgtctattaaaaattgtttaaacttaatttCACCTATACCGTCTGCTGATGAAACTACGTTCGAAAAACGGAGAAAAAGGAAATCAGAAGGAACTGCTGTATGGACCAAAAGTCCTTATGTGGAAGAAATAAAGCAAAAAGAAACTAATAAATCTATAAAACTACAAAGAAAATCAGCAAGAGCTGTCAAAAGAAATGTATTTCAGTCAACATCATCAATAATTATGAGTGATGAAGACGCTATAGAAGAACCATATCAAGACGAGGAATCAGATGAAGACGCGTCTTGTCTATACTGTAACGATACCTACAAGCGATCTAAAGCAGGGGAGTCTTGGATTAGATGCCAAAAGTGCAAAAGTTGGTGCCATAATGACTGTGCAGGCATTCCATTGAGACAAAAAAAATTCGTTTTGCCAGAGGGCTCCATCCTGGGCCCACTGTTGTTTATAATATTCGTGAATGATATGCCAGATTACTTACACAATGTAAAGACATGTTTATATGCAGATGATACCACCATATTAGCTAGATCTTCTTTAGAAAAAGACATcgataatatttcattaaaggcAATCGCTGAAGTTGAAGAATGGTTAAATGCCAAGAAATTAAAACTGAACACTGACAAGACAAAGCGGCTAATGCTTACCACAAGACCAACTGTTGGAAACACGTCTTTAAGATTTCTGGGCATGTATATAAACGGTGGACTTAGATAG
- Protein Sequence
- MVSNYQRKSNGQTWSEADMSNAIKAIQEKRMGWLKASKYFNVPQATLRRRTTNKNKYATGTNKIMGTKTSLPIEAENEVVEHILQLESRLFGVTATELRKLAYDLAVRKKYPHKFNSTTKCAGWDWLKGFRSRHPEISLRTPEPTSAARARGFNRPQVQKFFRLISETMETENIPNSRIYNMDESALTTVHKPPKVFAKKGKKQVGSITSGERGQHVTLVACMNSAGRYIPPALIFPRKNYKAEYFDGSPPDTLGLCYETGYMVSELFVKWLDHFIKHVKPTREEKVILILDGHGSHKSLDALLKAKQNGIILICLPPHSTHRLQPLDVAFFGPLEIFYNSESALWMKNNPGRTISLYQISTLFCSAYTKAATMGNAISGFKNTGIVPLNPDIFPDHLYAPCEVTDNEKWFENQTTEQSEIQNMDSQPEEENVQDINVDLQSASTSEENVIENGLSIKNCLNLISPIPSADETTFEKRRKRKSEGTAVWTKSPYVEEIKQKETNKSIKLQRKSARAVKRNVFQSTSSIIMSDEDAIEEPYQDEESDEDASCLYCNDTYKRSKAGESWIRCQKCKSWCHNDCAGIPLRQKKFVLPEGSILGPLLFIIFVNDMPDYLHNVKTCLYADDTTILARSSLEKDIDNISLKAIAEVEEWLNAKKLKLNTDKTKRLMLTTRPTVGNTSLRFLGMYINGGLR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00067105; iTF_00067106; iTF_00067107; iTF_00067118; iTF_00067377; iTF_00067065; iTF_00067097; iTF_00067098; iTF_00067101; iTF_00067102; iTF_00067039; iTF_00067103; iTF_00067104; iTF_00067073; iTF_00067074; iTF_00067075; iTF_00066865;
- 90% Identity
- iTF_00067073;
- 80% Identity
- -