Asol063837.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720677.1:97696154-97699106[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.7e-07 3e-05 26.8 0.0 1 39 163 201 163 206 0.86
Sequence Information
- Coding Sequence
- ATGAAACCATGTTTTACTCAAGATAATAACATAGATACTGTtacaaataatattgaaaatacattAGCATACCTTAGTGCAGATAAATGTAATTTTGGTTGGAATTACTTTACATTTATTGGTAATTTACAACCTGATCAAAAACAATTGGTTGAAGAAAGAGGTTTCAAGTTTTTAAAAGTTCTTTTAAAAGAATTAATCATGAGATTGCCAGATAACCTAATATTGtttaaaaatttaaagtttttaaaaCCAGAAGTTTGTCTCAATGTGAAACGTCCATGTTTTAAGGATTTACCATTTCTAGACTGCTTTATTGAACAAGAGGACATATTTAAATGTGAATTACAGTGGGAGAAACTTGTAACAATAAAACATGATCAATCTTTGTTAGACAACACCTATAAATTTTGGATATATGTAGGGGAGGGTGGTCCACAAGCAATGGCGAGAAATCGGAACAGAAAAACCAACATAGGATTGTCCTCTGAAGAATCTATGAGAGAAGCAGTGCGACTTGTCTTGCAAAATGGTTTGTCACTTCGTAAAGCTGCTCAGTTAAAGAATGTTTCCTTTCAAACATTAGCTAGATATGTGAAAAAGCAAAAGATGAACGAAGGCGAAAATATTAGAATGAGACCTAACTATGCGTGCAGACAAATTATGACATCAGACCAGGAAAATATGTTATCAAATTATTTAGAAGTATGTTCCAAGATGAACTATGGCTTAACAACTCTTGACTGTCGTCGATTGGCATATGAAACTGCTGTAAAAAATGACATCAAATTCCCAGATACATGGTCAGAGAATAAAGCAGCGGGGTTAGAATGGATGAGAGGTTTTCTAAAGCGACACCCCAAGTTAAGTATCAGACAACCAGAGGCCTGTAGCCTTTCACGGGCAACGTCCTTTAACAGGCATAATGTGGGAGTTTTTTTCGATAAATTGGAGAACGTCCTAAGAAGAAACGACAATTTTGCTAATGGTTCAAGAATTTGGAATCTCGATGAGACCGGAACTACAACTGTCCAAAAACCAAAAAAAGTTATAGCTTGCAAAGGAGTAAAGCAAGTAAGCCAAACAACAAGTGGAGAGCGAGGCACCTTAGTAACGGTATGCTGTTTTATAAGTGCGACCGGCAATACAATACCACCAGCTATTATATTCCCACGAGTTCACTTCAAATCGCACATGCTGCGGAATGGTCCTTCTGGAAGCCTAGGGCTTGCAGCGCCAACAGGTTGGATGAATGCTGaactatttattgaagttatgCGTCACTTTATTAAGCACACCAACTCTTCAATAGAGAATCCTACATTTCTGTTGTTTGACAATCATGAAAGTCATCTATCGATTGAATGCATTGATCTAGCCAAATCACATGGTGTCACAATTCTTACGTTTCCACCACATTGTAGTAATAAACTTCAGCCCCTAGATGTTGGAGTGTATTTTTCATTCAAAGCTCATTATAATCGAGCTGTTGACTCCTGGTTAATGCACCATCCAGGAATACCCATGAACATATACGATATTCCCGAATGTATTACTACTGCGTTTCAGCATTCTATGACACCAATCAACATATCATCGGGTTTCCGGAAGTCAGGAATATTTCCATTCAATCGCGACATTTTTACAGACGACGATTTCCTCCCCAGCAGCGTTACTGACAGATCTTTGGACCATCCGTCTCTTCCAGGTTCTAGTGGTTTAAACACATCCAAACCTTCAGATTTGAATGAACCTATAAATAATGTCGAGCAACAATGTGACGTTCCAGAAACGCCATCTATCTCAGCAACCAGTTTTCCTGAAAATAAGTGCGCTAACGACGTTTCTGATATTTTACCCAACcctaagaaaatttttgtaagtCCTCAACAGTTTAGAGGGTACCCAAAGGCAGCAGCTAGAAAACAGGTGCAACGCAGAAAACGCGGCAAAAGCTTCATTCCGACCGATACCCCCGAGAAATTAGAGTTGGAAGCAAAGAACGCAAAAAAACTCAAAACAAAGGCAAAAACAGTTAAAAGAAAACTGTTAGAATCAGAGAGTAGCTCATCAAACAATGAAAGTGAAGTTTCGGAAGGTTCGTCAGAGTATGATGAAGACATGGAGGCACCGGTAACAGGATTTGAAGAACTTGACAGAGATGTGATAAAAGATGATTACGTCCTAGTGAAATTTGCTGGTAAAAAGTCAATAAAATACTTTGTCGGAAAAATAATAAGTGAAATAAACAGTGGCCATGAGTATGATATTAGTTACCTACGAAGAAAGGCAAAATCTACCAAATTTTGTTATCCCAATGTTCCTGAAATTACTTCTGTTTTGCAAGAAGACATTATTATGATCCTCCCAAGCCCTAAATTATTTGGGAAAACTAAAAGACAAAATCAGTATGTTCAATTTGAagtcaattttggaaatattgaTGTACAATAA
- Protein Sequence
- MKPCFTQDNNIDTVTNNIENTLAYLSADKCNFGWNYFTFIGNLQPDQKQLVEERGFKFLKVLLKELIMRLPDNLILFKNLKFLKPEVCLNVKRPCFKDLPFLDCFIEQEDIFKCELQWEKLVTIKHDQSLLDNTYKFWIYVGEGGPQAMARNRNRKTNIGLSSEESMREAVRLVLQNGLSLRKAAQLKNVSFQTLARYVKKQKMNEGENIRMRPNYACRQIMTSDQENMLSNYLEVCSKMNYGLTTLDCRRLAYETAVKNDIKFPDTWSENKAAGLEWMRGFLKRHPKLSIRQPEACSLSRATSFNRHNVGVFFDKLENVLRRNDNFANGSRIWNLDETGTTTVQKPKKVIACKGVKQVSQTTSGERGTLVTVCCFISATGNTIPPAIIFPRVHFKSHMLRNGPSGSLGLAAPTGWMNAELFIEVMRHFIKHTNSSIENPTFLLFDNHESHLSIECIDLAKSHGVTILTFPPHCSNKLQPLDVGVYFSFKAHYNRAVDSWLMHHPGIPMNIYDIPECITTAFQHSMTPINISSGFRKSGIFPFNRDIFTDDDFLPSSVTDRSLDHPSLPGSSGLNTSKPSDLNEPINNVEQQCDVPETPSISATSFPENKCANDVSDILPNPKKIFVSPQQFRGYPKAAARKQVQRRKRGKSFIPTDTPEKLELEAKNAKKLKTKAKTVKRKLLESESSSSNNESEVSEGSSEYDEDMEAPVTGFEELDRDVIKDDYVLVKFAGKKSIKYFVGKIISEINSGHEYDISYLRRKAKSTKFCYPNVPEITSVLQEDIIMILPSPKLFGKTKRQNQYVQFEVNFGNIDVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00068716; iTF_00067138; iTF_00067140; iTF_00067142; iTF_00067144; iTF_00067145; iTF_00067146; iTF_00067115; iTF_00067148; iTF_00067117; iTF_00067149; iTF_00067213; iTF_00067151; iTF_00067153; iTF_00067130; iTF_00067868; iTF_00067134; iTF_00067141; iTF_00067129;
- 90% Identity
- iTF_00067138; iTF_00067140; iTF_00067142; iTF_00067144; iTF_00067145; iTF_00067146; iTF_00067148; iTF_00067153; iTF_00067130; iTF_00067868; iTF_00067134; iTF_00067141; iTF_00067213; iTF_00068716; iTF_00067151; iTF_00067129;
- 80% Identity
- -