Asol093982.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720679.1:92098820-92099926[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-07 1.5e-05 27.8 0.0 1 38 18 55 18 57 0.93
Sequence Information
- Coding Sequence
- ATGgtaagaaaatacaaaaagaaacttggagcgagtaattataaaaattatgaccCAGAAAATGTAGAAAAAGCTCTCGAGAAAGTTATAGACCATCGATGGAGTCTGCGAAAGGCTGCTAAAATATATAAAGTCCCATATGGCACCCTAAATAATAGATATCATGGACTGCGTATTAACAAAAATGGTGGCCAGTCGGTgttttctaaaaatgaagaaaTGTCTTTTATTGAGTCTATCACTATTTGTGGAGACTGGGGGTTTCCCTTGACTATTATGGACATTAGGCAACTTGCAAAAAACTATCTAGATAGCCAGGGCCGCACTGTGGAAAAATTTGATCATAATTTGCCGGGTAGAGATTGGGCATATTCTCTGTTGCACAGGTATAAAAACATAGTATCCCATAAATTAGCAGCAAATATTAAACGAACTCGTGCTGATGTGTCAAGAGAAATTATAGTTGAATATTTCGAAAATCTGAAAGTAACATTAGAGGGAATTCCAGCGTCAAATATATTCAACTATGATGAAACCAATTTGCAAGACAATCCGGGACAAAACAAAATGCTGTTCCGTAGAGGAACTAAATACCCAGAACGCATTTGTAACTTCACTAAAAGTGCAACATCAATTATGATATGCGGTTCCGCTTCGGGAGTGCTCTTGCCGCCTTACGTGATTTACAAATCAGAAAAAATGTGGGTGCAGTGGACTGAGAAAGGTCCAAAAGGGCTACCATGCTGTGATGCAAGGTGCTGCTCAACAGGTTCCCGTTATACCCGGACGCATCACGGTTGGATGGATGCCCAAACTTTTGGAGATTGGTTTATTTCTTCCTATCTACCGCATGCCAAGAGACTGGAAGGGCGAAAAGTTTTATTAGGCGACAATTTATCGACTCACTTCACGAATGAGGTACTAAAGCTATGTGCGGAAAATAATATATCATTTGTTTGTCTCCCGAAGAATTCCACTCATCTAACGCAACCCTTGGATGTTGGATTTTTTCGGCCATTCAAAATTGCTTGGAGGGCTGTTTTGACTAGATGGAAAGCTACAAATAAACTTGCGGCATCTATTGATAAGAAGGACTTTCCATACTAA
- Protein Sequence
- MVRKYKKKLGASNYKNYDPENVEKALEKVIDHRWSLRKAAKIYKVPYGTLNNRYHGLRINKNGGQSVFSKNEEMSFIESITICGDWGFPLTIMDIRQLAKNYLDSQGRTVEKFDHNLPGRDWAYSLLHRYKNIVSHKLAANIKRTRADVSREIIVEYFENLKVTLEGIPASNIFNYDETNLQDNPGQNKMLFRRGTKYPERICNFTKSATSIMICGSASGVLLPPYVIYKSEKMWVQWTEKGPKGLPCCDARCCSTGSRYTRTHHGWMDAQTFGDWFISSYLPHAKRLEGRKVLLGDNLSTHFTNEVLKLCAENNISFVCLPKNSTHLTQPLDVGFFRPFKIAWRAVLTRWKATNKLAASIDKKDFPY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00067058; iTF_00067128; iTF_00067036; iTF_00067136;
- 90% Identity
- iTF_00067058;
- 80% Identity
- -