Asol051505.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720677.1:39801666-39803609[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3e-07 1.6e-05 27.7 0.0 5 42 18 55 17 58 0.92
Sequence Information
- Coding Sequence
- atgcCTCGAAGTAAAACCGGAAAAAAACGCGAAGCTATCAACGTGGTTGGTCTTAAAGCAGCTGTAAATGATGTTCTGACTAACAATATAAGCCTGAGAGATGCTTCAAGGCTGCATAATATTGCTAGATCTACTTTATCACGTCATATTCAATTGCATCGTGAATCTGGAAATCAAACTTTTAATTATGTAGCGACAAATGCTGTAAAAAAAGTATTCTCTGAAGAGGAAGAAAAGCAGTTAAGAGAGTATTTAGAGTTCTCAGCTCGACTGAACTACGGTTTAAACAAACAGCAAGTCCGAGAGTTGGCTTTTCAGTATGCTTGTGCAAATAAGAAAGTACTGCCTGATAAGTGGAGGGAAGAAAAAAAAGCCGGCAGAGAGTGGCTTAGGTGCTTCCTAAAGCGTCATTCACAATTGTTATTGAGAAAACCTGAGGCCACCAGTTTGTCGCGCTCCACAAGTTTcaacaaaaaaaatgtcgaagaatttttttcgaaacttaaagTCTGTCTACAAAAATACAAATTTGCTCCACAAAATATTTACAATGTAGATGAGACTGGTAATACCACAGTTCATGTTCCACCGCGTATCATAGCTCCTAAAGGAGTAAAACAAGTTGGGTGCATGACATCAGGTGAACGTGGTATTAACGTAACTATGATAGCTGCTATAAATGCCATAGGAAACCATGTACCACCAATGCTGATTTTCCCACGTGTTCATTTCAAACAGCACATGTTGAACGGGGCGCCTCCAGGAACTGTTGGGGCTGCAAATCCTTCAGGTTGGTCTAATGAAGAAAAATTTCTTGAGTTTATGAGACATTTCATTGAGTATGTGAGGCCCACTAAAGAAAATCCGGTCCTGTTGGTATTCGATAATCATGAGAGTCATATTTCAATCCCCGTGATTGATCTAGCAAAATCCAACGGCGTGGTGTTACTTACATTCCCTCCACATACATCGCATAAGCTACAACCATTAGACCGAACCGTATTTGGTCCTTACAAGACTTATTACAATCTAGCTAGTAATGAGTGGATGTTGCAAAATCCAGGAAAACCTATTTCGATTTACCAAATTGCTGAAATCGTCGGAAAGGCCTACCCAAGAGCTTTTACTCAACAGAACATCACTAAAGGATTCTCAGTAACAGGCATTTATCCTTTCAATGCTGAAGTATTTGGTGAAGACGAATTCTTGAGTGCTTTTGTAACAGACCGACCGAACATTGAATTATCAAATGAAGAACAGGAACAGTTTACAAATATTGATGAACCTGGACCATCCCATCAGTTTCAGAATGTTCCAAGGGAGCAAAAAAATGATATTGTGTCACCCCAAATGATCAGGCCGTATTCCAAGGCTGCACCGCGAAAGACCCAAAGAggccgaaaaaaaggaaaatcaagAATATTAACAGAAaccaaaaaatcaaaaaataaaattcaaaaagtaAAGAGGAAAGTTTTGCAAGAAGAGAGTTCCGACGATGACAACATTGAAATACTTACTCAAGATTCTAGTGACGATGACAATTACTTAGAAAAGTTAGTTGAAGAATCAAATCTTGAAATGGAAATGGAAGAGCAATTAGTAGGAAATTACCCAATGTTGGAAGGTGATTTTGTCTTAGTTGAATTGAAAGGAAAGAAGTCTGTGCGACATTACATAGccgaaataaaaaagaaattagagGAAGGAGTTTTTGAGGTTGtgtatctaaaaaaaattatgaatagTAACAAATTCGTAAGAAATGAAGAAACATACGAACTGTGCGATTCAGATATACTGAAGAAATTGCCACAACTACAAGTAGTTGGTGGTTCAGGGCGTCGAATGGAACAGTTTATCTTCCCATTAGACTTTCTGTCTTATAATATGTCATAA
- Protein Sequence
- MPRSKTGKKREAINVVGLKAAVNDVLTNNISLRDASRLHNIARSTLSRHIQLHRESGNQTFNYVATNAVKKVFSEEEEKQLREYLEFSARLNYGLNKQQVRELAFQYACANKKVLPDKWREEKKAGREWLRCFLKRHSQLLLRKPEATSLSRSTSFNKKNVEEFFSKLKVCLQKYKFAPQNIYNVDETGNTTVHVPPRIIAPKGVKQVGCMTSGERGINVTMIAAINAIGNHVPPMLIFPRVHFKQHMLNGAPPGTVGAANPSGWSNEEKFLEFMRHFIEYVRPTKENPVLLVFDNHESHISIPVIDLAKSNGVVLLTFPPHTSHKLQPLDRTVFGPYKTYYNLASNEWMLQNPGKPISIYQIAEIVGKAYPRAFTQQNITKGFSVTGIYPFNAEVFGEDEFLSAFVTDRPNIELSNEEQEQFTNIDEPGPSHQFQNVPREQKNDIVSPQMIRPYSKAAPRKTQRGRKKGKSRILTETKKSKNKIQKVKRKVLQEESSDDDNIEILTQDSSDDDNYLEKLVEESNLEMEMEEQLVGNYPMLEGDFVLVELKGKKSVRHYIAEIKKKLEEGVFEVVYLKKIMNSNKFVRNEETYELCDSDILKKLPQLQVVGGSGRRMEQFIFPLDFLSYNMS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00066991;
- 90% Identity
- iTF_00067076; iTF_00067079; iTF_00067080; iTF_00067081; iTF_00067083; iTF_00067082; iTF_00067052; iTF_00067084; iTF_00067085; iTF_00066991; iTF_00067088; iTF_00067067; iTF_00067089; iTF_00067069;
- 80% Identity
- -