Asol087075.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720679.1:13097789-13100284[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-07 1.1e-05 28.2 0.0 2 36 16 49 15 56 0.91
Sequence Information
- Coding Sequence
- ATGCCTAAAACACCAAGTGGTAAAAAATATGACAAAACATATGAGGAGGAAACAATACAAAAAGCGCTTGATAGTATTAAAAATGGAATGTCGAAAAAAAAGGCACCTGAAGTATTCAACGTACCTCGATCGACTCTTCAATTTCGCCTGAGCGATAAGTTTACCAAAGTTTCCCATGGGCCATCACCAATTTTAACACATGACGAAGAACGTGCGTTAGTGGACTGGGTGAAGGACTGTAGCAGAAAAGGATTTCCAAGAAGAAAAGAAGACCTTCAAGCGTCTGTAAAAGATTTTTTAGACAAGGAATCAAGACCAAATCCTTTCAAAGATAATATGCCTCAAGACGGGTGGTATTATTCTTTTTTAAGAAGAAATCCTGAGCTAACACACAGAACGGCAGAAGGTGTCACTGCATCCAGTTCAAATGTGTCCGAAAGAGACATAAGAAAATGGTTTAATCAAATCGAAACTTACCTAAAGGAAAAGAATGTATACAATGTCTTACTTAATCCCGAAAGGATATATAATGGCGACGAGACCAACTTTAATTTATGTCCCAAAAATAAGAAAGTGTTAGCACCGCGTGGCGCAAAGAATGTTTACGAAATTGAACGAGGACCTGCGAAATCAACTTTAACTGTGATGTTTACATTTTCAGCAGAAGGCAAAATGGTTCCACCGATGGTTGTATACCCTTACAAACGAGTCCCGGAAGAAGTAGTTTCCTCATTGCCTGTAGGATGGAAACTTGGAAAAAGCGATAATGGTTGGATGACCTCTGAATTATTCTATGAATACATAGGAAATATTTTCTATCCATACCTTATTGATAACAAAATCACTTTTCCCGTAATACTTTTTGTGGATGGTCATACTACTCACTTGACATATCATCTGAGTCAACTTTGCACTAAATTGAACATTATTTTGGTGGCGTTGTATCCCAACTCAACCAGGATTTTACAACCTGCTGATGTATCTGCCTTTAAACCGATTAAGTCCGATTGGAAAAAAGCTCATATAAAGTGGAACAGAGATAACCCTAAACAGGCTGTAACAAGAGAAAAGTTTGCCGGTGTGCTTAAAACAGTAATAGATGAGGTAAAGGCCGAAACTCTACAAAATGGTTTTCGCACCTGTGGTCTATTTCCATGGAACCCTGAGgcaataaattatacaaaatgtctAGGCATTAGTAATAATGCTAAAACtgacttaaaaaaaaatgataaacatACTCGTAATGTAAAACGACCCGAACCTTATGACACTATTGACTTCAAAACGTTTGAAAGCATTGTAGGAGCAGAAGTACTTAGTACATTGGAAGACAATCAAAATGATTTGACTAATGAGATGAAGATTCTGAGAGACatatatcaaaattttaaatcaGATCAATTTTGTGATGTTGATAATCAGTTTGGTACCGAGCACAACTTCCAACAAGACATTATCTTTCAGAATAACCAAAATGAGTTGGAGCAGCAGGATAATCAGCCTGTTTTATTTCCAAGTGAAAACCTAAGTTTAGGGCAGAAGAATGTGGAATTTGATTTTGTAGGGCTTACCAAAGATGATTTTGATTTAAGTCAAGCTAGTATCATTTTTACAAGCAACTTGACAGATAATCTGGAGATACAGGAAGACTTATTGAGTCTAAGTAAAGACACACTAGTACATGACTTTTCCACGAAAAGTTTTTCTAGTGAAAAATGTAGAGTTACAGGGGATAAAATACTGAACATTGACCAAGCAGGGGAAATAAATGAGATTGATATCTTTACTAATGGCAAACCTGTAGAAAATgtcgaagaaaatttgaataaaacaacttcaacaaataatattaatattataaaaaattacttatcATGGCCTGGAACTCCACAGAGAAAAGGGAAAAGAAACACAGAAAAGGAGTCATTCGTAATCTCATCTTCAAGTTGGAAACGAATGAAGGAGAAGAAAATTGAcgcaaaaaaagaaaaagagagaaagaaagaagaaagaaagcAGAAGATTCTGGAAAAAAAAAACGTTGCCACGGAAAGGAAGTTAAAGATTCAAGAAAGAAAAAACGTTACCACGCAAAAAAAGTTAAAGGTAAAAACGCAGACAGAAAACACTATGGAGCAGAAAGCTGTAAAAGCAACTTTGCTTTGTGGAAACGAACCAAAGGTTAACATCCTCTCTGATGTAAAAATCCCCCATATTCGTCAACAAGAGAGTCATGTAAGATTTTTATTTAGAGACGAAATGACTAAAATCGAACCCGATTCAGAAAATGATTTTAAAGACAATAATAGAGTTTTCAAGGGCCTATGTTACATTTGCGTTAGTAATATACATGTAAATAATGTTGGAATAAATTGTCTCCATTGCGTTAGAACTTTTCACCCACAGTGCATAAGAAAACACAACAATATGCCTCCGATTGTGAATAAATTTGTATGTACGACTTGTGCAAAGACTAGGAAAGAAacaaattga
- Protein Sequence
- MPKTPSGKKYDKTYEEETIQKALDSIKNGMSKKKAPEVFNVPRSTLQFRLSDKFTKVSHGPSPILTHDEERALVDWVKDCSRKGFPRRKEDLQASVKDFLDKESRPNPFKDNMPQDGWYYSFLRRNPELTHRTAEGVTASSSNVSERDIRKWFNQIETYLKEKNVYNVLLNPERIYNGDETNFNLCPKNKKVLAPRGAKNVYEIERGPAKSTLTVMFTFSAEGKMVPPMVVYPYKRVPEEVVSSLPVGWKLGKSDNGWMTSELFYEYIGNIFYPYLIDNKITFPVILFVDGHTTHLTYHLSQLCTKLNIILVALYPNSTRILQPADVSAFKPIKSDWKKAHIKWNRDNPKQAVTREKFAGVLKTVIDEVKAETLQNGFRTCGLFPWNPEAINYTKCLGISNNAKTDLKKNDKHTRNVKRPEPYDTIDFKTFESIVGAEVLSTLEDNQNDLTNEMKILRDIYQNFKSDQFCDVDNQFGTEHNFQQDIIFQNNQNELEQQDNQPVLFPSENLSLGQKNVEFDFVGLTKDDFDLSQASIIFTSNLTDNLEIQEDLLSLSKDTLVHDFSTKSFSSEKCRVTGDKILNIDQAGEINEIDIFTNGKPVENVEENLNKTTSTNNINIIKNYLSWPGTPQRKGKRNTEKESFVISSSSWKRMKEKKIDAKKEKERKKEERKQKILEKKNVATERKLKIQERKNVTTQKKLKVKTQTENTMEQKAVKATLLCGNEPKVNILSDVKIPHIRQQESHVRFLFRDEMTKIEPDSENDFKDNNRVFKGLCYICVSNIHVNNVGINCLHCVRTFHPQCIRKHNNMPPIVNKFVCTTCAKTRKETN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00066439; iTF_00066442; iTF_00066446; iTF_00066451; iTF_00066452; iTF_00066488; iTF_00066489; iTF_00066873; iTF_00066490; iTF_00066650; iTF_00066491; iTF_00066492; iTF_00066493; iTF_00066245; iTF_00066437; iTF_00066438; iTF_00066450;
- 90% Identity
- iTF_00066450;
- 80% Identity
- -