Asol055093.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720677.1:54898662-54899174[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-07 1.3e-05 28.0 0.0 4 39 17 53 14 55 0.88
Sequence Information
- Coding Sequence
- ATGGTAAGAAGAAAGAAAGAACGATCAAGGGCGAAATTTACAGGTCAACAAATGACGGCAGCAGTCCAAGAAGTTGAAACTAATGGAACTTCACTTCGCGTTGCTGCAGAGATGTTTAATATTaacttttcaacactgagaagatatgttttaaaagAAAGGGATAACCCAGATGCCAAAATGGTACCCAATTATGCTGTACGACTAGTATTTGAACCACAGCAAGAGGCCTTACTGTGTAGTTATATTAAGACATGCAGCAAAATGGCGTTTGGATTAGATACCAGTAAAGGTAGACAACTGGCATATGAAATGGCAGTAAAAAACAATATAACGACACCGGAATCTTGGAAAATCAACAAAAGCGCAAGCAAAGATTGGCTACGAGCATTCTTAAAACGAAATTCTACGTTAAGCCTTAGGAAGCCTGGAACATGTTCATTGTCTAGGCTTACTTCGTTTACCAAACCTAATGTTGACAGattttttttcacatttacaaGAAATATATGA
- Protein Sequence
- MVRRKKERSRAKFTGQQMTAAVQEVETNGTSLRVAAEMFNINFSTLRRYVLKERDNPDAKMVPNYAVRLVFEPQQEALLCSYIKTCSKMAFGLDTSKGRQLAYEMAVKNNITTPESWKINKSASKDWLRAFLKRNSTLSLRKPGTCSLSRLTSFTKPNVDRFFFTFTRNI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00067001; iTF_00066939; iTF_00988018;
- 90% Identity
- iTF_00988018; iTF_00067001; iTF_00066939;
- 80% Identity
- -