Asol107927.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720680.1:93411768-93413579[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.9e-08 2.1e-06 30.5 0.0 1 38 23 60 23 66 0.89
Sequence Information
- Coding Sequence
- atgcCTAAAGCGGTCAAAAAGACCCAAGGAAAGGCGAAAACCAGTTCGCCACAACGTAAAATGTGGGATGAGGAAAACatgaaaaaggcaataatagcAGTTAGAAGCAAAAGAATGGGTTATATAAAAGCATGTAAAACATTCAATGTGCCTCGTGCCAccctttacagactttgtaagaaGGATGGAGCTGCTAGTGAGGTATGCCAAACGAAACTGGGGAGGAAACCAGTTTTGCCGGATCATTTGGAAAATGAATTAGTAAAGCATTGCCTAGCtatggagaaaaccttttatGGATTAACTAGGCGGGATGTCCGTAATCTTGCGTTCCAGTTAGCAAGAAGAAATAACGTTCCACATCCTTTCTCATTACTGAAAAAATCTGCTGGTAAGGACTGGCTAAATCGTTTCAGATTAAGGCATAAGGATGTGTTAAGCCTCAGAAAGCCGACGGGAACGTCGTTTGCACGAGCAGTGGGCTTTAACAAGCAAAACGTTAACGAGTTTTTTGATCTGTTAGAGacagaaatagcaaaaaaaaactttttagcTAATCAGATTTTCAACGTCGATGAAAGTGGCCTTAGCATTGTACAATCAAAATGCCCTGAGGTTTTTTCACAAAGGGGAAAACGACAAATCGGTGCACTAACATCTGCAGAGCGGGGCTCTCTGGTGACTTGTGTTTTGTGTATGAGTGCGAGTGGCAATTTTGTGCCCCCTTTGCTCATATTTCCTCGTAAAAATTCAAGCGAATTAATACAGAAGGGAGCTCCACCAGGAAGTGTTTTTGCCTTCCATCCATCTGGGTGGATTCAGACAGATATATTTACGCAGTGGTTCAACcattttatagaatatgtaagaCAAAGTACCGAAAACCCTGTGCTTTTGATTTTGGATGGCCATCATACCCACACTCGAAACTTGGATGTTATTGTCGCTGCAAGGCAAAATCACGTAACTTTGTTGTGCTTACCACCTCACACAACGCACAAGATGCAGCCACTCGATAAATCTGTAATGGGGGCATTGAAAACCTATTACAATGAAGAAATTCGCCAATTTTTACGGCAAAATAATCGGCCAATATCTCATTTTGACATAAGTGAACTTTTTGGTGAAgcatatctgaaaatacaaactggcgaaagagcaatcaatggatttcgacaaacaggtctgtttccagtaaacagaaatatttttaccgaagaagatttcctagaggaggcacacagaaatccaGAAGTGCCTAGACGACTAGAGGAACAACCAGTTTTACCGAAAGACATAGTTCCTATTTCTGTTCTTAAAAAACGACGAGGCACAAGAGGTCGAAAATCGGGGACCGCCACTCTTTTGACTTCAACTCCAAACAAGGATGAACTGGAAGAGtcacttacatcaaaaaatgaaaaaaacaaagttaaaaGAAACATTGGGCTTGAAGGAAATAGAAAACCAACCAATGACGCAAAACCTGGAACCAGCAAAATGGAAGATGACACCAAAGTTACTTTGAGTAGTGTGAGGAAAAAAACGAGAAAGCAACTGGTAGAAAACGATGAATCGTCGGATGATTTAGATGAAGATATCCCAATCTTAGATGACTCTACTGATTATGAAGATTTCCCAAGCAACAACAATAACCCACAAGATGATGCAGAATGTCTTTTCTGTTCAGAACGTTTTACGACTGATTCGAGAGGAGAAATTTGGATACAGTGCCTAAGATGCGAACTTAGGGCTCATGAACTGTGCGCCGATTCCGAACAGGATTGTTATGTTTGCGATTTTTGTCGTTAG
- Protein Sequence
- MPKAVKKTQGKAKTSSPQRKMWDEENMKKAIIAVRSKRMGYIKACKTFNVPRATLYRLCKKDGAASEVCQTKLGRKPVLPDHLENELVKHCLAMEKTFYGLTRRDVRNLAFQLARRNNVPHPFSLLKKSAGKDWLNRFRLRHKDVLSLRKPTGTSFARAVGFNKQNVNEFFDLLETEIAKKNFLANQIFNVDESGLSIVQSKCPEVFSQRGKRQIGALTSAERGSLVTCVLCMSASGNFVPPLLIFPRKNSSELIQKGAPPGSVFAFHPSGWIQTDIFTQWFNHFIEYVRQSTENPVLLILDGHHTHTRNLDVIVAARQNHVTLLCLPPHTTHKMQPLDKSVMGALKTYYNEEIRQFLRQNNRPISHFDISELFGEAYLKIQTGERAINGFRQTGLFPVNRNIFTEEDFLEEAHRNPEVPRRLEEQPVLPKDIVPISVLKKRRGTRGRKSGTATLLTSTPNKDELEESLTSKNEKNKVKRNIGLEGNRKPTNDAKPGTSKMEDDTKVTLSSVRKKTRKQLVENDESSDDLDEDIPILDDSTDYEDFPSNNNNPQDDAECLFCSERFTTDSRGEIWIQCLRCELRAHELCADSEQDCYVCDFCR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00066724;
- 90% Identity
- iTF_00066724; iTF_00066729; iTF_00066699; iTF_00066766; iTF_00066703; iTF_00066737; iTF_00066710; iTF_00066329; iTF_00066715; iTF_00066762; iTF_00067566; iTF_00066705; iTF_00067410; iTF_00066712; iTF_00066557; iTF_00066717; iTF_00067870; iTF_00066694;
- 80% Identity
- -