Asol034665.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720676.1:77657748-77659603[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.8e-08 2.1e-06 30.5 0.0 2 43 19 60 18 61 0.91
Sequence Information
- Coding Sequence
- ATGCCGAGACGTTATATACGAAAACGGGGAGCTCCTGAAAGAGCAACCTGGATAGAACAGGCGTTAAAAAATGCTGCAGACGCTGTTGGTGCAGGGACAATGGGTTTGAATGAAGCGGCTCGGACTTATGGTATTCCACCCCGTACACTTCGAACACGCATCCAAAAAAATGAGTTTACGAAATGTGGTCTTGGAAAGACTTCTCTCGTGGGTTATGAAAATGGAGAAGAACTGGTTCGCCACATGCCAAAATTAGAAAAATCTGGATTTCCTTGCACACGTGTGGATATCAGAAGAATGGCTTATCAAGTCgctgaaaaattcaatgtcaaGCATAACTTCGATACCATGAAAGAAATGGCTTTGAAGCAGTGGCTGCAGAGCTTTTTAGAACAACATGCGAATCTCAGCGTCAGGCAAGCGAAGGGAATGTCACGTGCACGAGCGTTAGGATTTAATAGAGAAGAAATAGACGGTTTTTTTAAACTTCTACAAACAACTCTTGAAGAAAATAACCTTTTTGGGAAACCGGGCCATATCTTTAATATGGATGAGAGTGGGGTACAAATGAATAATAAGCCAGGGAAAGTTATTGCCACCAAAGGTATTCCTGTAATGAAAGGTGTCAATAAAAAGGCCAAATTTGTGGATGGGTTACCTCCAGGCTCAAATGTTTACATAAACAAGAAATCTGCGTACATAAATTCAGAATTGTTCCTAAAATGGCTAACTGAACATTTCATTCTGCGAAAGTCCGAAGGAAAGGTTTTATTACTCTTGGATGGACATGGGTCTCACACTAACGACATGGACATGTTACAAACGGCAGCTGATAATGACGTGATTTTCCTCGGTCTACCGAGTCATTCAACACATGGACTTCAGCCACTGGATAAGTCCTTCTTTAAACCCATGAAGACTCATTTTTCTAGTGAACTTTGTCATTGGATATTAACcaacaaagaaagaaagattaCCAGGTATCAAGCTGGTAAGTTAATTGGAGCTGCTTGGGGTCGTGCAGCAACCGCTTCGAATGCTACATCCGGTTTTGAAGCCTGTGGGATATTTTCTCTACACCTAGAGTTAAATTCTTCGATTGGTGAGCAACGTGTGGTAACTCCTTCCACTGATGAACAACAAGAGACAACACCCTCAGCTAGCCGACAACTTGACCCAACACCCTCAAGCAGTCGGCGACGTAGCCCACCATCCACAACCGTTGAGCACCTTGCCCCGACACCCGCAACCAGTGACCTACATGATTCACCTACTTGCACTGAAGATAATATAACTCCCTCAAAATTCTTATCAGACATATCGCCTGTACCAGTTGTGTCCAAGGCAGCAGTTAAGCGTTTAAAACAATCTGCTAAGCTTTTAAATTCGTcaatagaaatacaaaaaaagcGAAACAAAACACTGGAAGCTctgaaattgaaacaagaaaaagaaaataggaaGAGGAAAATGGCAGACAATAAAAAAGAGAAAGAACAAGGAAAAATTAGTGTAAAACGGAAGATACGAAACGATGAGGATTGTGCGTGTTGTGAGTGCAAAGAGACATACGCTACGACCAGAAGAGCTGTTGATTGGATTCAGTGCGTCTCTTGCAAGGCATGGCTTCATGAAGACTGCACCGATTGGGGAGATTTTTGCAACAAGTGTGGTCGCAGCGATAGCTCGGACGATGATTAG
- Protein Sequence
- MPRRYIRKRGAPERATWIEQALKNAADAVGAGTMGLNEAARTYGIPPRTLRTRIQKNEFTKCGLGKTSLVGYENGEELVRHMPKLEKSGFPCTRVDIRRMAYQVAEKFNVKHNFDTMKEMALKQWLQSFLEQHANLSVRQAKGMSRARALGFNREEIDGFFKLLQTTLEENNLFGKPGHIFNMDESGVQMNNKPGKVIATKGIPVMKGVNKKAKFVDGLPPGSNVYINKKSAYINSELFLKWLTEHFILRKSEGKVLLLLDGHGSHTNDMDMLQTAADNDVIFLGLPSHSTHGLQPLDKSFFKPMKTHFSSELCHWILTNKERKITRYQAGKLIGAAWGRAATASNATSGFEACGIFSLHLELNSSIGEQRVVTPSTDEQQETTPSASRQLDPTPSSSRRRSPPSTTVEHLAPTPATSDLHDSPTCTEDNITPSKFLSDISPVPVVSKAAVKRLKQSAKLLNSSIEIQKKRNKTLEALKLKQEKENRKRKMADNKKEKEQGKISVKRKIRNDEDCACCECKETYATTRRAVDWIQCVSCKAWLHEDCTDWGDFCNKCGRSDSSDDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00066696; iTF_00066473; iTF_00066208; iTF_00067163; iTF_00066512; iTF_00066159; iTF_00066160; iTF_00066161; iTF_00067715; iTF_00067180; iTF_01240242;
- 90% Identity
- iTF_00066473; iTF_00066208; iTF_00066696; iTF_00067715; iTF_00067163; iTF_00066512;
- 80% Identity
- -