Basic Information

Insect: Amphimallon solstitiale
Gene Symbol: lap-2
Assembly: GCA_963170755.1
Location: OY720680.1:34149380-34160988[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.5e-08 1.9e-06 30.7 0.0 1 42 18 60 18 63 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.5e-08	1.9e-06	30.7	0.0	1	42	18	60	18	63	0.88

Sequence Information

Coding Sequence: ATGCCGAGAAAGTACGTCAGGAAAACCAATGTTGTTCCTAGAGCTACATGGTCAGAAGAAAACCTCAACACAGCCATAATAATGGTATCAACTAGGGCCATGGGGGTGAACCAGGCTAGCCGCTTCTACAATATCCCGTCTCGAACCTTAAGAAGGAGGATAATAAGTGGTGATGGAACAAAAAAACCTTTGGGAAAACCACCAGCACTAggatttcaaaatgaaaaaagatTAGTCGCCCACATCAAACGATTGGAAGAAGCAGGTTTTGCTCCATCGCGTCGAACTACTAGACAACTCGCATTCGAATTTGCTAAAAAACTAGGCAAACAAAAGGCACTGCTCAGTAAGAATTCGAAAGAAAACAACACTCTAGCAGGCCCTCACTGGCTCTATTCGTTTTTAGAAAGACATCCAGAACTATCTGTGCGGCAATCAGAAGGTTTATCTTTGGCTCGTGCCAAAGGAATGTGTCGCGAAGAAGTGAACAATTTTTTTGCTTTATTGCAAAACACACTTGAACAAAATAACTTAATGGATAAACCTGCATCAATATATAACATGGATGAGTCGGGTATCCAACTGAACAATAAGCCTGGCAAAGTTATTGCGACTAAAGGATGTAAGGACGTTCATGTTTTAACATCTATGGAAAAAGGAGAGAACGTTACAATTGTAGCTTGTTGCAATGCCGAGGGAACGTTTTTGCCTCCAGTACTAATTTTGGAGGGAACTCGTAAGAAGATGGAGCATTTAAAAGATTTGCCACCTGGCTCGGACATCTACATGAACAAGCAATCGTCGTACATTAATACAGACCTGTTCCTAAAATGGTTTAAAGAACATTTTCTTCCTAGAAAAAGTCCTGGCCAGGCTCTTCTAATTTTAGATGGTCATACTTCTCACTGTTCATTAGAATTGTTAGAGATTGCAGATCAAAATAATGTGATTCTACTGTGCTTGCCTAGTCACACCACCCAAGCTTTGCAACCACTAGACAGGTCATTTTTTAAGCCAGTAAAAGATTATTTTAGAGAAGCTGctcaaaattttatgtttattcatAAAGAAAGGAAGATAGATAGGATGAGCGCAGGAAAATTGATTGGAGAAGCATGGAATAAGGCCAGTACAGTCGGAAACGGTGTATCTGGATTTCAAGCAACGGGGATTTTTCCTTTTAATCCGAGTGCAGTTCCTGaccattttttcaaaatatcggaTGTGGCAAACAGATTTGTTCTCCCGGAACAACAGGACCAAAATCGTACGACTGAAGACTCAAATGCTGTGATCGATTTTACTTTAAGGAATGACTTAGAGCAAAATGGTAACAACTATAGCGAAGTTGAAATGGAACCATTTCTAAATGTTGATGAGTTACCAGAAAACTTTTTCGATGACTCagacaattttattatgattcctAATATCACGGATAATAGTGATGACGCGACTGCGACTGAGACTGAGAATTCTCATTCTCAAAGTTTACAAGTTGAAATTATTGATGAGCAACAAAATTCTACAGAGACGGAATCTCAAAGTGTTCAATCTGATGCTATCGTAGAAACTCCGTCAAAATATTTAGAAGATATTGCGCCGATTCCATCAATTcctcaaagtaaatttaataaaaggaaACAGTCAGCCGAAATTTTAACTTCACAAGACTTTAtggataagaaaaagaaaaatactgatgccaaaggaaaaaaagttgttcaaaaGGAAAAGTCAAAAGGTAaagtaaaagaaactaaaaaagaaaaaaacaaactaaTGGGTAAAAATGGGAAAACACAAAAAAGAGACGATGCAAAAGATTCCCAAGATGATGTAGACTGCGTTGAGTGCCTGGAAAATTATCTATCTACGAAAGAGACACCAATACAAGTACGAGAGACTGCTCCTAAGAAGCTTCCGACAATTGAGAAAATAGGAATATGTACAGAGAATAAAGACAGAACAGCCTCTTTAGTAAAGCAAGCACTCATATTAGACACTGGACTTCGTGTAGCAAGAGACATAGGATGGGGCGATCCAGAAAGAATGGCGCCATCAAAAGTACAAGAATACGTACAAGATATATTTGCCCAATCTAGTATTAAAATAGACGTTGTTGATAATATAGATGTGATCACAAAGGAGTATCCATTATTCGAGGCTGTCAATCGAGCTGCTAGTGTGGTCGACAGACATAAAGGACGAATCATATATCTGGAATACAACCCACCAGATCCAACGAAAATCACAGAAACGTTATTCTTAGTTGGCAAAGGTGTCACGTACGATACGGGTGGTGCTGATATCAAGGCTGGAGGTATAATGGCTGGAATGTCCAGAGATAAGTGTGGTGCTGCAGCTGTTGCCGGTTTCATGAAAGTGGTAGATCTAATGAGACCTGCACACATAAAAGTTGTAGGAGCCTTGAGTATGGTCAGAAACAGTGTCGGATCTAACTGTTATGTCGCGGATGAGTTAATAAAGGCAAGGTCTGGAGCTTTAGTTAGAATTGGAAATACAGATGCTGAAGGCCGAATGGTTATGGCTGACGTGCTCTGCAAGCCCTATGTTTCGTTTGTTACCACTCCCCTTTACCTCACCGCTCCCCTCAGGAGTCCGTGTCATATTTCGAAAGAGTTACTTGAAGAGGACTTGGATCTACTTCTTAATCATCAGGACCATTACATTATTTTAACACCAGAAGACTTACCAACAGCTTCCTTAGAGAACAACACCGGCGCTTCAACTTTAAAAAATTTACCAGCATCTGAATTAATTGATTAG
Protein Sequence: MPRKYVRKTNVVPRATWSEENLNTAIIMVSTRAMGVNQASRFYNIPSRTLRRRIISGDGTKKPLGKPPALGFQNEKRLVAHIKRLEEAGFAPSRRTTRQLAFEFAKKLGKQKALLSKNSKENNTLAGPHWLYSFLERHPELSVRQSEGLSLARAKGMCREEVNNFFALLQNTLEQNNLMDKPASIYNMDESGIQLNNKPGKVIATKGCKDVHVLTSMEKGENVTIVACCNAEGTFLPPVLILEGTRKKMEHLKDLPPGSDIYMNKQSSYINTDLFLKWFKEHFLPRKSPGQALLILDGHTSHCSLELLEIADQNNVILLCLPSHTTQALQPLDRSFFKPVKDYFREAAQNFMFIHKERKIDRMSAGKLIGEAWNKASTVGNGVSGFQATGIFPFNPSAVPDHFFKISDVANRFVLPEQQDQNRTTEDSNAVIDFTLRNDLEQNGNNYSEVEMEPFLNVDELPENFFDDSDNFIMIPNITDNSDDATATETENSHSQSLQVEIIDEQQNSTETESQSVQSDAIVETPSKYLEDIAPIPSIPQSKFNKRKQSAEILTSQDFMDKKKKNTDAKGKKVVQKEKSKGKVKETKKEKNKLMGKNGKTQKRDDAKDSQDDVDCVECLENYLSTKETPIQVRETAPKKLPTIEKIGICTENKDRTASLVKQALILDTGLRVARDIGWGDPERMAPSKVQEYVQDIFAQSSIKIDVVDNIDVITKEYPLFEAVNRAASVVDRHKGRIIYLEYNPPDPTKITETLFLVGKGVTYDTGGADIKAGGIMAGMSRDKCGAAAVAGFMKVVDLMRPAHIKVVGALSMVRNSVGSNCYVADELIKARSGALVRIGNTDAEGRMVMADVLCKPYVSFVTTPLYLTAPLRSPCHISKELLEEDLDLLLNHQDHYIILTPEDLPTASLENNTGASTLKNLPASELID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -