Asol065854.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720677.1:112291661-112293727[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.9e-08 1.5e-06 30.9 0.1 4 42 19 57 17 60 0.92
Sequence Information
- Coding Sequence
- atgccCACCAAATATAAACGGAAATGCCCTGATAGGGGCAAATGGAGCAGTCAACAATTGGAACAAGCCTTAGAGGCAGTTAATAACGAGCACATGGGGATCAATGAAGCGTCCAGAGCATTTGCCATTCCCTCTCGAACTTTAAGAAGAAGAAAAGCTCAACATAATAATTCACAAAAAGTTCCAATGGGCCCTTCGTCTTTGTTCGGCAGAGATAATGAGAAAAAACTAGTTAAACACATACAAAAACTGCAGGCAAGAGGATTTGCACCGTCCATGGACGATTTGAGGAGAACTGCGTTTAAATTTGCCGAATTTTTGGGTATCCAACATCACTTTAACTCAGAAAAAGAAATGGCGGGATACGACTGGATGAATTCTTTTTTACGACGCAATCCGGAGCTGAGTATGAGAAAGTCGGAGGGAGTATCCTTGGCGAGAGCTGAAGGCATGACTAAGCAAAGggttgataattattttcagtTACTTAGCGCTGCCCTTGAAGAACACGAACTAATGGATAAACCGGGGCATATATACAACATGGATGAGACTGGGTTGCAGCTAAATAATAACTCTGGCTTTGTTATAGCCACTAAAGGTTCAAAAGCTGTGTCTTCAGTTACATCCGGCGAGAAAGGCGAGACAATTACTGTCGTAGCATGCTGTAATGCGGAAGGCAACTTTCTCCCACCTACGTGTATCATGAAGGGAGTAAAGAAAAGAATTGAATATGAAGATGAGATGCCCCCTGGGTCATTTGTATATATGTCTCCCAAGTCAGCGTACATAAATGCAGAAATATTCAAAAACTGGCTAACAAATCAGTTTTTACCAAGAAAACCAgaaggaaaagtaattttaatagtAGATGGCCATTTCTCTCACTGTGATATCAACACCCTAGAATTTGCAGAAGCAAATGACATTGTTATGCTGAGCTTACCCAGCCACACTACGCATTATCTACAACCTTTAGACAGGGCAGTATTCAAGTCATTAAAAGCTGCATATGGTAAAGCTTGTAACAACTGGATGAAGGCTAATCCTTACAGAAAAATAGGTGGGCTGCAGTTCGGTTCATTATTAAGCGAGGCTTGGGGCAAATCTGCGACCAGCAGTAACGCCATATCGGCCTTTAGGTCAACaggcatatatccattaaatccGGAAGTGATTCCGGAATATGCATATTTGATAATAGATAGCCAGACACCACAAAACGAGAACCAAGGCACTCAGCTGCCAGCAACTTTGCAACTTACATCTGAAGAAGTAGAGATAATCGCTCCAGAAATGTTGATTGAGCCATCTATTCAATTAAAACCGTCCTGTCTACCAGTGGCTGGATCATCTTCAAAAATAGTGGctgagacatcttcagaagtgactgagacatcttcagaagtgGCTGGGCCATCTTCACCAATAGTGGCTGAGATATCTGCAAAACCAATGACTCCGCCAATTAACAAGGGAAAAGTGGAAGCACCCATAGATGCAGTGGCCGGTCTATCAACAAGTGTGCTCGATAATATTACGTCTGAAACTAGTGACATTACGCCTGGAAAATTGTTAGAACAAATACATCCAGTTCCAATCTCAAAACTCCCTGAATCTACTCGTAAGCGTGGTCGGCAGGTTGCTACAATTCTAACTTCAGCAGAAAATTTAGCAACTAAACGAGCAAAGCAGAACAATAAAGAAGATAAGAAGATTCAGCaagaattgaagaaaaataaaaggaaGATGAAGAAAAATAAAGGCAAACAGCCAAAGAAAGTTTACCAAAGTGACTCAAGTGAAACTGAAAATGAAGATGTTTTATCTCTGCATGACAGGAGTAGCGACGATGATAGCTCACAGACCGAGTGTGTGGGCTGTGGTGAAGAATATCAACACACCAATAAGAAGGATGACTGGGTGCAATGTCTTCATTGTGCTAAGTGGTTTCACGAAGGATGTAGTAGTTTCGAAAATACATGTGATATGTGCGGTAACATAATGTCTAGGCGAAAGTAA
- Protein Sequence
- MPTKYKRKCPDRGKWSSQQLEQALEAVNNEHMGINEASRAFAIPSRTLRRRKAQHNNSQKVPMGPSSLFGRDNEKKLVKHIQKLQARGFAPSMDDLRRTAFKFAEFLGIQHHFNSEKEMAGYDWMNSFLRRNPELSMRKSEGVSLARAEGMTKQRVDNYFQLLSAALEEHELMDKPGHIYNMDETGLQLNNNSGFVIATKGSKAVSSVTSGEKGETITVVACCNAEGNFLPPTCIMKGVKKRIEYEDEMPPGSFVYMSPKSAYINAEIFKNWLTNQFLPRKPEGKVILIVDGHFSHCDINTLEFAEANDIVMLSLPSHTTHYLQPLDRAVFKSLKAAYGKACNNWMKANPYRKIGGLQFGSLLSEAWGKSATSSNAISAFRSTGIYPLNPEVIPEYAYLIIDSQTPQNENQGTQLPATLQLTSEEVEIIAPEMLIEPSIQLKPSCLPVAGSSSKIVAETSSEVTETSSEVAGPSSPIVAEISAKPMTPPINKGKVEAPIDAVAGLSTSVLDNITSETSDITPGKLLEQIHPVPISKLPESTRKRGRQVATILTSAENLATKRAKQNNKEDKKIQQELKKNKRKMKKNKGKQPKKVYQSDSSETENEDVLSLHDRSSDDDSSQTECVGCGEEYQHTNKKDDWVQCLHCAKWFHEGCSSFENTCDMCGNIMSRRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00066168;
- 90% Identity
- iTF_00066189; iTF_00066196; iTF_00066219; iTF_00066213; iTF_00067045; iTF_00067238; iTF_00066185; iTF_00066187; iTF_00066190; iTF_00066191; iTF_00066195; iTF_00066197; iTF_00066199; iTF_00066201; iTF_00066202; iTF_00066173; iTF_00066205; iTF_00066200; iTF_00066180; iTF_00066212; iTF_00066182; iTF_00066132; iTF_00066183; iTF_00066634; iTF_00066677; iTF_00066168;
- 80% Identity
- -