Basic Information

Insect: Amphimallon solstitiale
Gene Symbol: clz9
Assembly: GCA_963170755.1
Location: OY720683.1:94695437-94697188[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2e-08 1.1e-06 31.4 0.0 5 41 1 37 1 40 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2e-08	1.1e-06	31.4	0.0	5	41	1	37	1	40	0.92

Sequence Information

Coding Sequence: ATGATAGAAGCTATTAAAGCTTGCAGAGAAAAAAGAATGGGTTATAAAAAAAGTGCCAAGACATACAACGTTCCACAAACAACTCTAGAAAGATATGTAGCAAGGGGAGAAGAGCCAGAGAAGATTGTGAATGAGAGGTTAGGAAGAAAGCCAGTATTTTCAGCACAAATGGAAGAAGAATTGGTTAATCACTGTCTAGAACTGGAAAGAAACTTTTTTGGAGTCACTCAGAAAGACATTTGTCGCCTGGCGTTTGAACTTTGCGagcaaaacaatataaaaaaccCTTTTAACAGTCACAAGCAATGTGCAGGTTCTCGGTGGCTAAAGAGCTTTATTAACCGCCATCCAATCCTTTCCTTTAGAAAACCGCAAGGAATATCCTACGCTCGTGTGAAATCTTTCactaaagaaaatgttgaaaatttctttaatttatacGAGAATGTTTTGGAAAAAGTTAATAACCACCCATCACGCATTTTCAATTGTGATGAAACGGGTATAACCATTGTACAACATAAACAACAGAAAGTTATTGCCTTAAAAGGGAAAAAGCAAGTCGCTGCTTTAACATCTGCAGAACGTGGGGCCTTAATGACTGTTGTCATGTGTTTTGGGGCTACCGGTCAGTATAtccctccactaattgtttttcctaGAAAAAATATGAAGGCCGAGCTAATGAATGGAATGCCTCCAGGAGCTGTTTCAGCATGCCATAAATCTGGATGGATACAGCAAGAAATCTTTGTTCAATGGTTTGAACATTTTGTTCGTCATACTAAACCTACTGAAAACGACCCAGTTGTTTTGCTGCTGGACGGTCATTATTCGCACACAAGAAACCTTGAACTCATTAATCTAGCAAGAAACAACCATGTGTATATTGTTTGTTTCCCTCCTCATAGTACAAATAAAATGCAGCCCTTGGATGTTGGAGAACTTTTTGGTAGAGCCTATTTAAAGGCTGCCACATTAGGTACTGTCATACATGGCTTTCGGAAAACAGGTCTGTTTCCTGTTAACAGGCACGTTTTTAAAGAGCATGAGTTTGTAGCTGAGCAACTATCTAAGGAAGATAATCCTGTGTCAGTAGCAGAATTAAATCACGAGATCCCAGATATGGAAtcaattgaagaagaagaagcaatGGAACCAAAAGATAATCTTTTTCATGTGGCGCCTGCTGATTTATTACCCGTCCCAAGTTTAGCAGagaaaatagttatcaaaaagCGATCAAACGCTGGTAAAGCAACTATTATCACGAGTACCCCATACAAAAAAGAGTTAGAAGAAAGTCTCAATAAGAAAAATTCTCCATCTACATCAAAGGTTAATCGACAAGTCTTCTTTAGTAAGGATAAAAATAAGGAAGGACAAGAAAAACCAACATCGAAAAGGAAACTAGTAACCCGAGGCAAAAAGAGACAAATGTCTTCATCCTCGTCAGATTCATCTGCAGAAATCTTTTTGCAAGAAAGTGACGATTCACCAAATGAAGATGAAGATGCAGAATGTTTGTTCTGTAACCAACCATTTTCGGAAGATATGTGTGGAGAACTGTGGCTTAGATGCTCTGTCTGTTTAAAATGGGCGCATAGTGAGTGTGCAGGAGAAAAAGGCAAACGTTACATTTGTGACTTATGCAAATAA
Protein Sequence: MIEAIKACREKRMGYKKSAKTYNVPQTTLERYVARGEEPEKIVNERLGRKPVFSAQMEEELVNHCLELERNFFGVTQKDICRLAFELCEQNNIKNPFNSHKQCAGSRWLKSFINRHPILSFRKPQGISYARVKSFTKENVENFFNLYENVLEKVNNHPSRIFNCDETGITIVQHKQQKVIALKGKKQVAALTSAERGALMTVVMCFGATGQYIPPLIVFPRKNMKAELMNGMPPGAVSACHKSGWIQQEIFVQWFEHFVRHTKPTENDPVVLLLDGHYSHTRNLELINLARNNHVYIVCFPPHSTNKMQPLDVGELFGRAYLKAATLGTVIHGFRKTGLFPVNRHVFKEHEFVAEQLSKEDNPVSVAELNHEIPDMESIEEEEAMEPKDNLFHVAPADLLPVPSLAEKIVIKKRSNAGKATIITSTPYKKELEESLNKKNSPSTSKVNRQVFFSKDKNKEGQEKPTSKRKLVTRGKKRQMSSSSSDSSAEIFLQESDDSPNEDEDAECLFCNQPFSEDMCGELWLRCSVCLKWAHSECAGEKGKRYICDLCK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00065668; iTF_00066617; iTF_00065728; iTF_00065733; iTF_00065738; iTF_00065772; iTF_00065729; iTF_00065730; iTF_00065732; iTF_00065734; iTF_00065735; iTF_00065737; iTF_00066633; iTF_00065739; iTF_00065740; iTF_00066188; iTF_00065614; iTF_00065807; iTF_00065811; iTF_00065876; iTF_00065723; iTF_00065787; iTF_00065722;
90% Identity: iTF_00066617;
80% Identity: -