Asol149812.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720684.1:20921966-20923285[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-08 1.2e-06 31.3 0.0 1 38 23 60 23 67 0.88
Sequence Information
- Coding Sequence
- atgcCTAAAGCGGTCAAAAAGACCcaaggaaaagctaaaaccagttCGCCACAACGTAAAATGTGGGATGAGGAAAACatgaaaaaggcaataatagcAGTTAGAAGCAAAAGAATGGGTTATTTAAAAGCATGTAAAACATTCAATGTGCCTCGTGCCAccctttacagactttgtaagaaGGATGGAGCTGCTAGTGAGGCATGCCAAACGAAACTGGGGAGGAAACCAGTTTTGCCGGATCATTTGGAAAATGAATTAGTAAAGCATTGCCTAGCtatggagaaaaccttttatGGATTAACTAGGCGGGATGTCCGTAATCTTGCGTTCCAGTTAGCAAGAAGAAATAACGTTCCACATCCTTTCTCATTACTGAAAAAATCTGCTGGTAAGGACTGGCTAAATCGTTTCAGATTAAGGCATAAGGATGTGTTAAGCCTCAGAAAGCCGACGGGAACGTCGTTTGCACGAGCAGTGGGCTTTAACAAGCAAAACGTTAACGAGTTTTTTGATCTGTTAGAGacagaaatagcaaaaaaaaacttttcagctAATCAGATTTTCAACGTCGATGAAAGTGGTCTTAGCATTGTACAATCAAAATACCCTGAGGTTTATTCACAAAGGGGAAAACGACAAATCGGTGCACTAACATCTGCAGAGCGGGGCTCTCTGGTGACTTGTGTTTTGTGTATGAGTGCGAGTGAAAATTTTGTGCCCCCTTTGCTCATATTTCCTCGTAAAAATTCAAGTGAATTAATAAAGAAGGGAGCTCCACCAGGAAGTGTTTTTGCCTTCCATCCATCTGGGTGGATTCAGACAGATATATTTACGCAGTGGTTCAACcattttatagaatatgtaagaCCAAGTACCGAAAACCCTGTGCTTTTGATTTTGGATGGCCATCATACCCACACTCGAAACTTGGATGTTATTGTCGCTGCAAGGCAAAATCACGTAACTTTGTTGTGCTTACCGCCTCACACAACGCACAAGATGCAGCCACTCGATAAATCTGTAATGGGGGCATTGAAAACCTATTCCAATGAAGAAATTCGCCAATTTTTACGGCAAAATAATCGGCCAATATCTCATTTTGATATAAGTGAACTCTTTGGTGAAgcatatctgaaaatacaaactggcgaaagagcaatcaatggatttcgacaaacaggtctgtttccagtaaacagaaatatttttaccgaagaagatttcctagaggaggcacacagaaatccaGAAGTGCCTAGACGACTAGAGGAACAACCAGTTTTACCGAAAGACAATAGTTCCTATTCCTGTTCTTAA
- Protein Sequence
- MPKAVKKTQGKAKTSSPQRKMWDEENMKKAIIAVRSKRMGYLKACKTFNVPRATLYRLCKKDGAASEACQTKLGRKPVLPDHLENELVKHCLAMEKTFYGLTRRDVRNLAFQLARRNNVPHPFSLLKKSAGKDWLNRFRLRHKDVLSLRKPTGTSFARAVGFNKQNVNEFFDLLETEIAKKNFSANQIFNVDESGLSIVQSKYPEVYSQRGKRQIGALTSAERGSLVTCVLCMSASENFVPPLLIFPRKNSSELIKKGAPPGSVFAFHPSGWIQTDIFTQWFNHFIEYVRPSTENPVLLILDGHHTHTRNLDVIVAARQNHVTLLCLPPHTTHKMQPLDKSVMGALKTYSNEEIRQFLRQNNRPISHFDISELFGEAYLKIQTGERAINGFRQTGLFPVNRNIFTEEDFLEEAHRNPEVPRRLEEQPVLPKDNSSYSCS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00066469; iTF_00066345; iTF_00066635; iTF_00066637; iTF_00066642; iTF_00066581; iTF_01104225; iTF_00066535; iTF_00066647; iTF_00066651;
- 90% Identity
- iTF_00066647;
- 80% Identity
- -