Asol059432.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- cheC
- Assembly
- GCA_963170755.1
- Location
- OY720677.1:75375457-75384883[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-06 8.7e-05 25.3 0.0 2 38 114 149 113 155 0.91 2 2 8.8 4.7e+02 3.8 0.0 22 38 721 737 711 740 0.86
Sequence Information
- Coding Sequence
- ATGGATGGGGGCGGGCGGTGTGTGGCTGTGATGCGTGACCTGTCGAAGGCGTTCGACTGTATGGACTATGAAATCTTGGTGCGGAAGCTGGAACGATATGGTGTGAGAGTGCAACTGGCTGAGGTTTTACGATCCTACTTTACTGGTAGGAGACAAGCTGTTTATGGTGAACGCATACCACGCACTTGTCCACTCTCGGATGACATATGGGATTCAACTCTGAGGGAATCAAGTCACGCAGCTGATCTGTTTGTGCTGCAGAAGAAGGCGTTGAGACCAATTGAACAGTTTGAAGATGAGCGCAATTATGTAAGAAAATCTAAACAGCATAGTTGGGAAGAGGAATCGATGATTGCTGCTCTAACATCTGTAAAAGAAGGAATGTCCGTAAATGCAGCGGCAAAACAGCATAATGTTCCTGTAGCGACTCTCTTTAGAAGGAGCAAAATGCAAGGAGAGTTAGATACTTTGGCTCAGAAGAAATTGGGGAGGTACCGAACCACCTTCACACCTGAGCAAGAAAAAGAGTTGGCCGCTTATCTTCTTGAAATGGATCGACGTCTGTTCGGCCTGACGATCCAAGACCTGAAATCAGTTGCATTCCAATATGCCGAGCTAAACCACATTCCaaattattttaataaggaaacAAGGAAAGCTGGCTGGGATTGGGTGCATGCATTCATGAAGAGAAACCAACAGCTTTCTCTTCGCTTACCCGAAAACACTTCAGCAGCCAGAGCATCCGCTTTCAATGCAACAAATGTCAAACGATTTTTTGACCTCTTAAATGAATTATACAATCAACACAACTTTACCGCAAGCCGCATTTACAATGTTGATGAGACGGGGATATCAACTGTGCCCAACAAGCCATCCAAAATAATATCGAAGAAAGGAAAAAAACAGGTTGGCAGTTTAGCTTCGGCAGAAAGGGGGACGCTGATTACAGCAACGATTTGCTTCAGTGCTGCTGGAAATTATGTCCCTCCTCTTCTGATTCTTCCACGAGTGAGAAGTAATCCTCTTTTTGAAATTGGCCTACCTCCAAATTCCGTAGTTGCGCCTCACAAAAGCGGATGGATGCAGACCGACATTTTTGTTCAGTGGTTTGAACATTTTCTAAAACATACAAAACCTTCTGAAGAGGATCCGGTTCTGCTTATTCTGGATGGACATGCCACCCATGTAAAAAACATTCGGCTAATAGAAATGGCTAAGGAGAAGCATGTAAAAATTTTAGTTATACCACCCCACACGTCGCATAGACTCCAACCCTTGGATGTGACGTTCATGTTTCCTCTGTCGGCATATTACGAACAAGCTGTTCGAGTTTGGTTGCGTGAAAATCCAGGCAAGGTTGTGACTGTTCTTCAAGTAGGAAAATTGTTTGGTGAGGCTTATAACCGGGCTGCTACAGTTCATAACGCAATGTCTGGGTTTTCGAAAACTGGAATTTATCCGTACAAACCAAATTTCCCTGATAATGTTTTTGAAGCAGCTGAAACAACAAATCGACCTCCAGTGCCTGGCTCGGAATCTAGTAACTCAAATCCTACGTTAACACTACATTCAGATGCTCCGACACCGGATAGACATTTAGGTTTAACAGTTTCACCACACCAGATCTTGCCAGTTCCTAAAGCTCCAATGAAATCCACTGAGGAAAAGAAACGAAAGAGGGGAACGTCAATGATACTCACAACTTCACCATATCTCGAAGAGCTAAAACAACTTAAAGCATCAGAAATGGCGAAGACAGCACAAACATCCAAAGCCAAGAAGAAAGTCAAAGCGAAATTATTTCAAGAGCCTGCCAAAACGGATACAAGTTCGGAAAGCGATGGCAACCTAAGTCTGCACGACTCAGACAGTGATTTGGACTATTTATCGCCTGATGAAAATGAACAAAGAACTCCTGACAAAATCACAGAAGACATGTTAGCAGTTAAGAGCTGGGTTCTTGTGGAATATAACTGTCAGTTGTACCCAGGCCAAGTGAAGGCAAAGAATTATAAAGGAGTGTCTGTAAGTTGTTTAGAAAAGACACAGAAATATTTCAAGTGGCCACAAAAGGAAGGCCAGCTCTTCTACGAGTGGAGTCAGGTAGATAGAACCAGAATCGTCTTTCAGCTGGAAAACGGTTGGACAATTATGAATTTAGCGGTAGATTTTGGAGTGGGAAGAAGTAGTATCTGGAGAATTAAAAGAAACTGGGAAAACGAGAGGACTGTAAAACGAAAGGTGGGTTTGGGTCGGCCTAAAACTACAAATGATCAAGAAGATGAGGACTTGGTTAATTTTTTGAGAGAAAGACCTATGGCCACTGCTGTAGAAGCAATTAATCTAAAGAATTTTCCAACATCACAAAGCACAGCACGTCGACGAATTGGACAACTATTATGCAGCCATGAATGA
- Protein Sequence
- MDGGGRCVAVMRDLSKAFDCMDYEILVRKLERYGVRVQLAEVLRSYFTGRRQAVYGERIPRTCPLSDDIWDSTLRESSHAADLFVLQKKALRPIEQFEDERNYVRKSKQHSWEEESMIAALTSVKEGMSVNAAAKQHNVPVATLFRRSKMQGELDTLAQKKLGRYRTTFTPEQEKELAAYLLEMDRRLFGLTIQDLKSVAFQYAELNHIPNYFNKETRKAGWDWVHAFMKRNQQLSLRLPENTSAARASAFNATNVKRFFDLLNELYNQHNFTASRIYNVDETGISTVPNKPSKIISKKGKKQVGSLASAERGTLITATICFSAAGNYVPPLLILPRVRSNPLFEIGLPPNSVVAPHKSGWMQTDIFVQWFEHFLKHTKPSEEDPVLLILDGHATHVKNIRLIEMAKEKHVKILVIPPHTSHRLQPLDVTFMFPLSAYYEQAVRVWLRENPGKVVTVLQVGKLFGEAYNRAATVHNAMSGFSKTGIYPYKPNFPDNVFEAAETTNRPPVPGSESSNSNPTLTLHSDAPTPDRHLGLTVSPHQILPVPKAPMKSTEEKKRKRGTSMILTTSPYLEELKQLKASEMAKTAQTSKAKKKVKAKLFQEPAKTDTSSESDGNLSLHDSDSDLDYLSPDENEQRTPDKITEDMLAVKSWVLVEYNCQLYPGQVKAKNYKGVSVSCLEKTQKYFKWPQKEGQLFYEWSQVDRTRIVFQLENGWTIMNLAVDFGVGRSSIWRIKRNWENERTVKRKVGLGRPKTTNDQEDEDLVNFLRERPMATAVEAINLKNFPTSQSTARRRIGQLLCSHE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -