Asol051672.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720677.1:40636372-40638384[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-08 9.7e-07 31.6 0.0 2 37 10 46 9 47 0.91
Sequence Information
- Coding Sequence
- ATGAGGAAAATACGAGGAAAATGGGATGAAGCAAGTATGAAATCGGCCATAGAAAAAGTGATGTTGAAGCAAATGACCATACGAACTGCAAGCACTAAGTTTGGTGTACCGAGGAGCACGTTAGGTGATCGTGTTAAAATACTTTTAAAGGGTGGAGAGATAACGCCTAAGCCTTGTTGCTCAAATAACAAAGGAGTGTTTCAGAAAACGTTTACTGATGAACAAGAGGAAATATTGTATGAACATGTGAAGGCTTTGGACGCTCAGCTGATGCCACTAAGCAGAAAAGAGTTCCTAAAACTAGCCTACAACCTTGCCGAGAGGCTAAATGTGTGTCACCGCTTTAATAAAGAGAAATGTATGGCTGGAAAAGATTTTTATTACGAGTTAATGAACCGTCACAAGGACTTAAGCCTGAGGACAGCCGAGTCAACAAGCTTACAGCGTGCTGTTGGTTTCAGCAAGGACAAAGTCGACCGATTCTTTGACCAGCTAACTAAGCTTATGGACAAACACAAATTCAATCCAACCCGTATCTTTAATGCGGACGAAACTGGAGTATCATGTGTACACAACAATAACTTGAAGGTCATGTCTGTAAAAGGCAAAAAACAAGTGGGAAAATTGACATCTGCAGAGAGGGGCAGAAACGTGACTGCACTTTTAGCCACCAATGCAACAGGGGACCAGTTTATTCCGCCTTTGTTTGTTTTCCCACGTGTAAGGATTGATAATGACTTGAAAAAATATGCTCCTCACGGAAGCATTTTTGATGGGCAAGTGAGCGGGTGGATCACTAAGGAGGGTTTCTTGAAATGGTTAAAAGCATTTGTTGAGCGGGTTAACCCTACTGAAAAGAGTCCTGTCTTGCTAATCATAGACGGACACTCTAGCCACAAGGATCTCGATGTGATCCTTTACGCTAAAGAAAATCACATTCACATGCTGAGCCTCCCACCACACACTTCCCACAAGATCCAACCATTAGATCGGTCAATTATGAAACCATTTAAAAATGCCTACTATGAAGCATGTGGAGTTTGGATGAGGAAGTACCCGAACATGAAGATAACTCTGAAAGACATAGCTGGGCTGGTAAATACTGCTTTTTCCCGAATCTGCAGGATGGAGTTGGCGCAATCTGGATTCCAATGTACAGGAATTTACCCTCTGAATCGGAATGTATTTTCAGATCTTGACTTTGCAGCATCACTCAGTAATAAATCACAGGAGGGCGAAGAAATGGCAACAGCTCTCGGTCAGATTGCAACTACTGCTGACCTTGATGATCTTCATCTGTCAGCTGATGCTTCAAGCTTGCCGAATGACCCTCTAGCCGATCAAACCCCACCGCTCGATCAGTGTACAGAACCTTGGCCCTCTAGTTCTTCCGACATGCCTGTGACCTCAAACCAAACATATGGTGAGAGCAAAGAAAAAACTAATTTAGACTCGTCAAGAACTCAATGCATCTTGGAAAATATATCTCCGTTACCAAACACCTCAAATGGGAAGTATAAAATAAGAGACCATCGCAGTGAGAAAAGTGAAATACTGACATCTACGCCCTACAAAGACCAACTTGTTGCGAAAAAGACCCTTCATGAAGAAAAGAAAGCCAAAGCTGAAGCGAAAAGAGCTAAAATAGAggaaaaaaagacaaaaaaagcAGAGGAACAGAAGCTAAAGCGGATGAAAAGACAAATGAAGAAAGAGAAAGTAGACGGATCCGCAAATACTgcacagaaaaataaaaacattcagCCCCAAAAAAGGAATCTGCCTTCCAATTCAGCAAAATTGAACGTGAAAAAATTCCTCAAGTTAGACGACGGCGCGGCTTTTTCGTCATCTTCAGACACAAATTGCATCATCTGTGGAGAGTCTTTCGACGGAGATTGGATCCAATGCAATACTTGCAAAGGGTGGGCCCATGAGAAATGTGCCAATCTTGAGGACCATctattttattattgtgacatGTGTAAGACAAAAAGTGATAATGAATTTTGA
- Protein Sequence
- MRKIRGKWDEASMKSAIEKVMLKQMTIRTASTKFGVPRSTLGDRVKILLKGGEITPKPCCSNNKGVFQKTFTDEQEEILYEHVKALDAQLMPLSRKEFLKLAYNLAERLNVCHRFNKEKCMAGKDFYYELMNRHKDLSLRTAESTSLQRAVGFSKDKVDRFFDQLTKLMDKHKFNPTRIFNADETGVSCVHNNNLKVMSVKGKKQVGKLTSAERGRNVTALLATNATGDQFIPPLFVFPRVRIDNDLKKYAPHGSIFDGQVSGWITKEGFLKWLKAFVERVNPTEKSPVLLIIDGHSSHKDLDVILYAKENHIHMLSLPPHTSHKIQPLDRSIMKPFKNAYYEACGVWMRKYPNMKITLKDIAGLVNTAFSRICRMELAQSGFQCTGIYPLNRNVFSDLDFAASLSNKSQEGEEMATALGQIATTADLDDLHLSADASSLPNDPLADQTPPLDQCTEPWPSSSSDMPVTSNQTYGESKEKTNLDSSRTQCILENISPLPNTSNGKYKIRDHRSEKSEILTSTPYKDQLVAKKTLHEEKKAKAEAKRAKIEEKKTKKAEEQKLKRMKRQMKKEKVDGSANTAQKNKNIQPQKRNLPSNSAKLNVKKFLKLDDGAAFSSSSDTNCIICGESFDGDWIQCNTCKGWAHEKCANLEDHLFYYCDMCKTKSDNEF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00066691; iTF_00066566; iTF_00066567; iTF_00066540; iTF_00066574; iTF_00066520; iTF_00066973; iTF_00066561; iTF_00066531; iTF_00066539; iTF_00066571; iTF_00066513; iTF_00066847;
- 90% Identity
- iTF_00066691; iTF_00066566; iTF_00066567; iTF_00066540; iTF_00066574; iTF_00066520; iTF_00066973; iTF_00066561; iTF_00066531; iTF_00066847; iTF_00066571;
- 80% Identity
- -