Asol059602.2
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720677.1:76325835-76327726[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.1e-07 2.7e-05 26.9 0.1 1 42 15 54 15 57 0.88
Sequence Information
- Coding Sequence
- ATGGTGAACAAATATCGAAGAAAAACTAATCAGGGTTCATGGACAGAAGAAAATATGCGTTTAGCGATAGAAGAAGCAAAAAAAAACTCTTTAGCGCGTGCTTCTAGAATCTATGGAATTCCATTAGGAACTCTGCATCGTCATGTAAAAAGTGGTACACATGAGAAGAAACTTGGAAGATTTAGAAGTGTGTTTAGCCAAGATGAGGAGAAAGAATTGAGTGATCATGCTAGAGATCTTGATGACAGATTCTATGGCCTAACAAAAGAGGCCCTGAAAGAGCTTGCATTTAAGGTTGCTAACCAAAATGGCATAAAAcatccatttaaaaataataatgcggGTGAAGCATGGTTGAAAGGATTTATGGCACGAAATCCTGCTTGTCTTATAGAAAAATACCACCTACAAGAACGTCCAGATGACATATTTAACATAGACGAAACCGGTGTCAAAACATCCGCACAGAAACCTCCAAAAGTTCTTTCCGGAAAAGGAAAACGTCAAGTGGGAGTTATAAGTTCAGCCGAAAAGGGTCAGCTCACAACTGTTATATGCTGCTGTAGCGCTGCTGGGAGATTCATTCCGCCATGCTTGATATTTGGAAATAGAAAGAAAATTAATGAAAGGCTGCTTGATGGTGGGCCAATAGGTTCTAAAGCATGGTGTTCTGATTCTGGATGGATTAACAGCGATCTTTTTGTGAAATGGTTGCAATTTTTCATTGATTGTGTACGTCCAAGTAAAGAATCACCTGCATTACTAATTTTGGATAACCACATTTCACATCAAAATTTAGATGCTCTTAATTTAGCAAGATCATCTGGAGTGATACTCCTTTCTGTTCCACCTCATACAACGCACAAGCTACAGCCACTTGACGTAGCTGTGTACAAACCCTTTAACACTGCGTTTGAAAGAGCTGTGGATAACTACAAAAAAAATCATCCTGGTAGACGGATAACTCAGTTTGAAGTTGCACAACTTGTTAAAGTTGcatttgaaaaaagtgctactattGAAACAGCATCAAATGGGTTTAGAAAAGCTGGTATTTTCCCTTACAACAGAGATATTTTTACAAATCTTGATTTTGCTCCTGCAGAGGTTCATCATATTCCTTCAGAGGATGAAGCACACCAGCAGAGGAACACAGACTCTTCGGATGAGGATATCCCACTGTCATCTGTTAAAGAAAGGCACAAAATTTCTACTTCTACCGTAACCTGCAATGTTAAGTCTTATCATCAATCACCAAATGCAACTTCAACCACGCAAGCACTGGTGCACTTTGAGCCTGAAGCTGGTCCTTCAGGTGTTTCTTCAAAAACATTAGCTTCGGATCCAAAGGTGACACCAATCAAGTTAGGTTCATTAAATGTAGACAAAAGTCCAGAAACATCTTACAGCAATTTACAGCCTACGTTTACAGCTGATTCAACTCCAGCACCATTGAAAAATAAGAAGGTGGTGCGAATATCTCCAAAAGACATCTTGCCTCTACCTAAAGCAGCGCATGCTGCCAATGCAACTAGGAAAGCAAAATGCCAGAAATCAGAAATTCTTACGAGCTCGCCTTACAAGTTAATGGTTGAAgagaaagaaaaaaggaaaatgcCAAAATCATGCAATCTTTTATCGAAGATAGAAGGGGAAAATCATTCTAAGCCATGTAGGACTAATAAGGGGACCGCTATTAAGGGCACAGGAAAAGAACAAGACACGTTTTGCCTGGTTTGTGGTGAAGAATATATATTGCCTCCAACTGAAACTTGGATTCAGTGTGATAAATGTGGAGATTGA
- Protein Sequence
- MVNKYRRKTNQGSWTEENMRLAIEEAKKNSLARASRIYGIPLGTLHRHVKSGTHEKKLGRFRSVFSQDEEKELSDHARDLDDRFYGLTKEALKELAFKVANQNGIKHPFKNNNAGEAWLKGFMARNPACLIEKYHLQERPDDIFNIDETGVKTSAQKPPKVLSGKGKRQVGVISSAEKGQLTTVICCCSAAGRFIPPCLIFGNRKKINERLLDGGPIGSKAWCSDSGWINSDLFVKWLQFFIDCVRPSKESPALLILDNHISHQNLDALNLARSSGVILLSVPPHTTHKLQPLDVAVYKPFNTAFERAVDNYKKNHPGRRITQFEVAQLVKVAFEKSATIETASNGFRKAGIFPYNRDIFTNLDFAPAEVHHIPSEDEAHQQRNTDSSDEDIPLSSVKERHKISTSTVTCNVKSYHQSPNATSTTQALVHFEPEAGPSGVSSKTLASDPKVTPIKLGSLNVDKSPETSYSNLQPTFTADSTPAPLKNKKVVRISPKDILPLPKAAHAANATRKAKCQKSEILTSSPYKLMVEEKEKRKMPKSCNLLSKIEGENHSKPCRTNKGTAIKGTGKEQDTFCLVCGEEYILPPTETWIQCDKCGD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00067695; iTF_00066941; iTF_00066946; iTF_00066864; iTF_00066813; iTF_00067018; iTF_00066801; iTF_00066804; iTF_00066811; iTF_00066814; iTF_00066468; iTF_00066770; iTF_00066803; iTF_00066868; iTF_00066709; iTF_00066780; iTF_00066719; iTF_00066848;
- 90% Identity
- iTF_00066848;
- 80% Identity
- -