Asol056440.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Amphimallon solstitiale
Gene Symbol
-
Assembly
GCA_963170755.1
Location
OY720677.1:61125250-61137349[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-08 7.2e-07 32.0 0.1 4 42 19 57 17 60 0.92

Sequence Information

Coding Sequence
atgccCACCAAGTATAAACGGAAATGCCCTGATAGGGGCAAATGGAGCAGTCAACAATTGGAACAAGCCTTAGAGGCAGTTAATAACGGGCACATGGGGATCAATGAAGCGTCCAGAGCATTTGCCATTCCCTCTCGAACTTTAAGAAGAAGAAAAGCTCAACATAATAATTCACAAAAAGTTCCAATGGGCCCTTCGTCTTTGTTCGGCAGAGATAATGAGAAAAAACTAGTTAAACACATACAAAAACTGCAGGCAAGAGGATTTGCACCGTCCATGGACGATTTGAGGAGAACTGCGTTTAAATTTGCCGAATTTTTGGGTATCCAACATCACTTTAACTCAGAAAAAGAAATGGCGGGATACGACTGGATGAATTCTTTTTTACGACGCAATCCGGAGCTGAGTATGAGAAAGTCGGAGGGAGTATCCTTGGCGAGAGCTGAAGGCATGACTAAGCAAAGggttgataattattttcagtTACTTAGCGCTGCCCTTGAAGAACACGAACTAATGGATAAACCGGGGCATATATACAACATGGATGAGACTGGGTTGCAGCTAAATAATAACCCTGGCTTTGTTATAGCCACTAAAGGTTCAAAAGCTGTGTCTTCAGTTACATCCGGCGAGAAAGGCGAGACAATTACTGTCGTAGCATGCTGTAATGCGGAAGGCAACTTTCTCCCACCTACGTGTATCATGAAGGGAGTAAAGAAAAGAATTGAATATGAAGATGGGATGCCCCCTGGGTCATTTGTATATATGTCTCCCAAGTCAGCGTACATAAATGCAGAAATATTCAAAAACTGGCTAACAAATCAGTTTTTACCAAGAAAACCAgaaggaaaagtaattttaatagtAGATGGCCATTCCTCTCACTGTGATATCAACACCCTAGAATTTGCAGAAGCAAATGACATTGTTATGCTGAGCTTACCCAGCCACACTACGCATTATCTACAACCTTTAGACAGGGCAGTATTCAAGTCATTAAAAGCTGCATATGGTAAAGCTTGTAACAACTGGATGAAGGCTAATCCTTACAGAAAAATAGGTAGGCTGCAGTTCGGTTCATTATTAAGCGAGGCTTGGGGCAAATCTGCGACCAGCAGTAACGCCATATCGGCCTTTAGGTCAACaggcatatatccattaaatccGGAAGTGATTCCGGAATATGCATATTTGATAATAGATAGACAGACACCACAAAACGAGAACCAAGGCACTCAGCTGCCAGCAACTTTGCAACTTACATCTGAAGAAGTAGAGATAATCGCTCCAGAAATGTTGATTGAGCCATCTATTCAATTAAAACCGTCCTGTCTACCAGTGGCTGGATCATCTTCAAAAATAGTGGctgagacatcttcagaagtggctgagacatcttcagaagtgactgagacatcttcagaagtgGCTGGGCCATCTTCACCAATAGTGGCTGAGATATCTGCAAAACCAATGACTCCGCCAATTAACAAGGGAAAAGTGGAAGCACCCATAGATGCAGTGGCCGGTCTATCAACAAGTGTGCTCGATAATATTACGTCTGAAACTAGTGACATTACGCCTGGAAAATTGTTAGAACAAATACATCCAGTTCCAATCTCAAAACTCCCTGAATCTACTCGTAAGCGTGGTCGGCAGGTTGCTACAATTCTAACTTCAGCAGAAAATTTAGCAACTAAACGAGCAAAGCAGAACAATAAAGAAGATAAGAAGATTCAGCaagaattgaagaaaaataaaaggaaGATGAAGAAAAATAAAGGCAAACAGCCAAAGAAAGTTTACCAAAGTGACTCAAGTGAAACTGAAAATGAAGATGTTTTATCTCTGCATGACAGGAGTAGCGACGATGATAGCTCACAGACCGAGTGTGTGGGCTGTGGTGAAGAATATCAACACACTAATAAGAAGGATGACTGGGTGCAATGTCTTCATTGTGCTAAGTGGTTTCACGAAGGATGTAGTAGTTTCGAAAATACATGTGATATGTGCGAGAATGGAATAGACGAAGAAGCATTTCTGTTATTAGAAAAAGACGTAGTTAAAGAGTTAATTCCAAAAATTGGAGATCGATTGAAGTTTTTAAACAAGCTATATTTATATAAAGCTGCACATAGTCAGtcTGATACTGGATCAAATACCAGCTTTATATCGACTGCTTCAACAGTAACTCTTGAAGAAGAGGAACAAGCAAATGATATCTTTGATATTACATTCTTGGAGCCACCAACCAAAAAGGCATGCCTTTCACACACTACTGACTACAACACTAAAACTGATTTCAACTCAAACAACACTCTTGTGTCAATTGTAGCAACAGAACCTGAAGAAAATCCAAATAATTTTACGGAAGCAAGAAATAATCCATTTTTAGAACCCCCTAACAAAAAGAAATGTCTATTAGATGCCTCCAACTTTGACAACAAGGATTTTGACAAATTTGTAATGAACAGCAGCGAATGGATAATCATatcacaaaataaacataaaattactgAATATATTCGATCAAAAATTGCCAAAGTAGCTCTTGATTATGTATTGGCAAAATATTCTACATCATCTATCCCGCAAGAGTCTTTTTTAAGAGTAGCTGAAGCCATCAGTAATATATTTCCACACGAgaataaaaacatatatttttgtcCTTATCAACCCAAAACTTCAAGCTCACCCAGAATTTTATCCTCTGGGAAACTATGGTCAAAATATATTAACTACAAAAGACTCTGCAAAACTATAAAACCTTTACAAAGTGAAACTGATACTGAAGAATTGGATGTGCCTTCTACATCAACAACGGATGAAGAAGAATTAAGCCAGTggaatgaatttttaaaacaCAACGTGGACAAGGAACAACATATTACACAGTTATGGAGTCAAACATTTAAGATTCGGAGGCAGTACTTAAAAACTACGAATCTGTGTCAATATATAAACACATATCCGGCTTTACGACAACCGTATGGATATAATTTACTAACAAAGGATTTTGAACTCCTTTatccaaaaaaagaaaatttattatactcCAAATGGACCAAAACGTCAGAAGCTATAATTCGTTTAGTAATTGAGAAAAAGGTTATATCTGAAGATTACCAGATTCaaaataaagagATCGATGCTATTAAATTACTGCcacttcttttcaatagtaccaCTGTTAAAACAGGCAGCAAACGGTGGCGACCttctaaattagaaataaaagaaagtttTTTGTTGCAGTTAAACAATCTTGGATCAGTAGAAGAAAAGCTAGAAGAACGACGACAAACACTAAGACTGCATAAGGAAACATTGCAACCTTTTCTAGTGTTAATTGAAGATGTCTCAAAAGTGTGTTCTTCATATGTGATTATCGATGACATTAAATATTTGATGGAATCTCCTGTGAAAGCGTTAGACGTTTGTTTTAAGTGTTTCTTTGCACTAGATGCCAAATATCCCGTTGAAAGCCAACAAATCTGGACATTTATTCAACAACAAATATATGATATATACACCGATCTTGATAAACGATACTGTGGAGTAAATACCATCAAATCCGAAATCAACAATTTTATGTCACAAAATTTTTTACTTATTATTCATTTTAGAATTATACATAAGTTGCATGATAAATCAGTGTATAAATGTGCCAATAATAATGGAAATTGCCAACGAATATTTCCATCATTAAATTCGTTTAGAAAACACATAAAACTTCATCACATTAACAACCAAAAAGAAAACTTTCCACCTGTAGATTCTGCTTTTAAACCTTCGGATACATTTgaagaaaattgtttaaaatgtgATCAAACGCTAAAAATTCCCGTGGATATACAGAacgaaaagaaagaaaataatacttCTGAGTCACATAGCTTAGAAAACATAAAGGCTACCACTGAGAAACAAATAGCTTTATTTATTTCTCAGTTATATGGAAATTTAAGATTACCTCGTAACCAAGTGCAAATTGTCGTAAATAATTTTCAAGAACTTATTCATCCATTTTTAGATACAATAAAAAATGTAACCGCAGATATAATGCAACGGAACAATATTCCATTAAATGAACGTAGTAACATTTCTAATATTATTGAccaatttaataacatatttcaaaatttggaaacAGAACATAAAAGATTAAATTTTTTAGAAAACAGCGAAATATATATTAAACCGGAAAGTTACATTGTGGGGCAAAAATTAGAACAACAAAAAAATGGAATAATGACACCTAAATCACTAACAGCCGAACATATATCAATAAGGGcggttttaaaatgtttttttgaattaaccAATGTTTATGATGAAACCATGAATTATTATAAGAAACTTAACACTCAATCTGAAATACTATGTAACATTGTTCAaggagatatttggaaaaaaagaATCAGCTTGTATCCTCCTGATGCCATAGTTTTTCcaattcttctttattttgatgaCTACGAAACAGGTAATTGTTTAGGATCGCATGCAGGCGTACATAAGTTAGGTGCAATTTATTACACAGTTCCAATAATCCCTCCAGAATTTCAGGCATCCCTGGACAATATCTTTTTAGCCAATCTGTTTCATAGTTCTGATCATAAAGAGTTCGGAAATGACAGTATATTTCCTAAATTAATAATGGAATTAAATAGTTTAGAATCTGAGGGTATAAAACTTACTATTAATGGTGGTAATATTCAGGTTTATTTTTTAGTATCTCAAATTATCGGAGATAATTTAGGGTTGAATACAATTTTAGGATACGTGGAAAGCTTTCGAGTTACTTATTTTTGTAGAATATGTAAACTTTCGAAAGATCAAACCGCTGAGGCTGTAACTCAGTCTTCCCTACATTTGagggatattgaaaattacgaaAATGACATACTTGTGAACAATGTTTCTCTTACTGGAATAAAAGAAAATTGTGTCTTTAATCAACTTAACAATTTTCACGTAGTACAAAACGTAGCAGTAGATATAATGCATGACTTGTTCGAAGGAGTTTTTAATTATGAAGTAGCTTTAATTTTACGTAAACTTAATGATAAGTGGACATATGTGAACGGAGATTCAAAGCAACCGTTCCTGGAAGCAGGTGATTCCGAAGAAACAATAAACACATTGATGCGTAATGACAGTATAGCTAAAGCGGATATTATATTGTCGATTAGTCCATCGGaattaaaacaaataaagggaTCTAAAACGTCACCAGATGTTTGGCTGAAATTACAGGAAATTTATCAGTCAAAAGGACCAGCTCGGAAAGCTACTATATTaaaacaattaacattaaatcaTATGGAATCAGGTGAAGAGGTACGTACACACATATCTAGATTCCTTTATATCGTAGACAAATTAAGGGAGATGGAAGTGGAAATAAATAACGATTTACTTGCTATCATGTTATTATACAGTCTGCCTTCGGAATACGAAAATTTTAGATGTGCTATCGAGTCCCGCGATGAGTTGCCAACACCTgagacacttaaaattaaaataatagagGAAAGTGAAGCCAGAAAAAAGGACACTCGCATTCAAAATGCTATGCTCgcgaataaaaattataataaatcacGGTTCGggaataaacaaataaaaagtgCACCTAATACAAGTGGAAATACCAACAACGACAAATTAGAATTTAAATTCAAGTGCCACAGATGTCGTGAAATTGGACATAGAGCCGCGGACTGCAGAAATAAGAAATACAACAATAGTGCAAACGCGAAAAATGCCGAAAACGTTGGTTTGTGCGCGTTAAATACTGAGAAATCATTTTCGGAAAATAAAAACACGAAATGGTGTCTAGACAGTGGCGCGACGTCTCACATTTGTAAAAGTGCGAATAATTTCTTAAAACTTGAAAATACCGACAGGGGATTATTGAACTTAGCGAACAGTGAATCAACAGAAATTGTTGCGAAGGGAGCTGCCACGTTTACGACAGATGTTTGCGGTGAAATAAAAAACATTACGTTGAGCGGTGCGTTACATGTGCCGGACTTGCGCGCGAACTTACTATCAGACGGAACGGTCGGAATAGTAAAGATAGTAGCTGATCGCATCGGAGAATTATATTATGTGCGTGAACATAAACAAGAAAATTCTGATTTGGTTGTGGATTCTGCATCTTCTGCACAATCATCGTCAGATCAAAGAAAGATGTGGCATAGACGTTTGGGTCATTTAAATGAAAAAGACTTGATGGAAATTAAACACAAAAACATCGTCAAAGGTCTTGAGTCTGTGAAACTTCAAGAAAACATTAAATGTGATATTTGTTTAGAAGGAAAAATGACCAGAACAGCGTTTCCAAAGAAATCAGACAGAAAAACAgaattattagaaattatacattCCGATGTATGTGGACCAATGAGAGTCGAATCACTCGGTACATTGTAG
Protein Sequence
MPTKYKRKCPDRGKWSSQQLEQALEAVNNGHMGINEASRAFAIPSRTLRRRKAQHNNSQKVPMGPSSLFGRDNEKKLVKHIQKLQARGFAPSMDDLRRTAFKFAEFLGIQHHFNSEKEMAGYDWMNSFLRRNPELSMRKSEGVSLARAEGMTKQRVDNYFQLLSAALEEHELMDKPGHIYNMDETGLQLNNNPGFVIATKGSKAVSSVTSGEKGETITVVACCNAEGNFLPPTCIMKGVKKRIEYEDGMPPGSFVYMSPKSAYINAEIFKNWLTNQFLPRKPEGKVILIVDGHSSHCDINTLEFAEANDIVMLSLPSHTTHYLQPLDRAVFKSLKAAYGKACNNWMKANPYRKIGRLQFGSLLSEAWGKSATSSNAISAFRSTGIYPLNPEVIPEYAYLIIDRQTPQNENQGTQLPATLQLTSEEVEIIAPEMLIEPSIQLKPSCLPVAGSSSKIVAETSSEVAETSSEVTETSSEVAGPSSPIVAEISAKPMTPPINKGKVEAPIDAVAGLSTSVLDNITSETSDITPGKLLEQIHPVPISKLPESTRKRGRQVATILTSAENLATKRAKQNNKEDKKIQQELKKNKRKMKKNKGKQPKKVYQSDSSETENEDVLSLHDRSSDDDSSQTECVGCGEEYQHTNKKDDWVQCLHCAKWFHEGCSSFENTCDMCENGIDEEAFLLLEKDVVKELIPKIGDRLKFLNKLYLYKAAHSQSDTGSNTSFISTASTVTLEEEEQANDIFDITFLEPPTKKACLSHTTDYNTKTDFNSNNTLVSIVATEPEENPNNFTEARNNPFLEPPNKKKCLLDASNFDNKDFDKFVMNSSEWIIISQNKHKITEYIRSKIAKVALDYVLAKYSTSSIPQESFLRVAEAISNIFPHENKNIYFCPYQPKTSSSPRILSSGKLWSKYINYKRLCKTIKPLQSETDTEELDVPSTSTTDEEELSQWNEFLKHNVDKEQHITQLWSQTFKIRRQYLKTTNLCQYINTYPALRQPYGYNLLTKDFELLYPKKENLLYSKWTKTSEAIIRLVIEKKVISEDYQIQNKEIDAIKLLPLLFNSTTVKTGSKRWRPSKLEIKESFLLQLNNLGSVEEKLEERRQTLRLHKETLQPFLVLIEDVSKVCSSYVIIDDIKYLMESPVKALDVCFKCFFALDAKYPVESQQIWTFIQQQIYDIYTDLDKRYCGVNTIKSEINNFMSQNFLLIIHFRIIHKLHDKSVYKCANNNGNCQRIFPSLNSFRKHIKLHHINNQKENFPPVDSAFKPSDTFEENCLKCDQTLKIPVDIQNEKKENNTSESHSLENIKATTEKQIALFISQLYGNLRLPRNQVQIVVNNFQELIHPFLDTIKNVTADIMQRNNIPLNERSNISNIIDQFNNIFQNLETEHKRLNFLENSEIYIKPESYIVGQKLEQQKNGIMTPKSLTAEHISIRAVLKCFFELTNVYDETMNYYKKLNTQSEILCNIVQGDIWKKRISLYPPDAIVFPILLYFDDYETGNCLGSHAGVHKLGAIYYTVPIIPPEFQASLDNIFLANLFHSSDHKEFGNDSIFPKLIMELNSLESEGIKLTINGGNIQVYFLVSQIIGDNLGLNTILGYVESFRVTYFCRICKLSKDQTAEAVTQSSLHLRDIENYENDILVNNVSLTGIKENCVFNQLNNFHVVQNVAVDIMHDLFEGVFNYEVALILRKLNDKWTYVNGDSKQPFLEAGDSEETINTLMRNDSIAKADIILSISPSELKQIKGSKTSPDVWLKLQEIYQSKGPARKATILKQLTLNHMESGEEVRTHISRFLYIVDKLREMEVEINNDLLAIMLLYSLPSEYENFRCAIESRDELPTPETLKIKIIEESEARKKDTRIQNAMLANKNYNKSRFGNKQIKSAPNTSGNTNNDKLEFKFKCHRCREIGHRAADCRNKKYNNSANAKNAENVGLCALNTEKSFSENKNTKWCLDSGATSHICKSANNFLKLENTDRGLLNLANSESTEIVAKGAATFTTDVCGEIKNITLSGALHVPDLRANLLSDGTVGIVKIVADRIGELYYVREHKQENSDLVVDSASSAQSSSDQRKMWHRRLGHLNEKDLMEIKHKNIVKGLESVKLQENIKCDICLEGKMTRTAFPKKSDRKTELLEIIHSDVCGPMRVESLGTL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-