Asol132188.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720682.1:82672028-82672838[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.5e-09 4e-07 32.8 0.0 2 40 10 47 9 51 0.92
Sequence Information
- Coding Sequence
- ATGCCGCCCAAGAGGGCTCGATGGCCAGAAACCCAGTTGCAACGAGCAATGGATGAAATTGATGTTGGTATGTCTGTCCGACAGGCATCAAGGGAATTTAAAATTCCACGCAGAACCCTCAGAAATCATGTGGCGACAAGAAGCACCAAAAATAAACTAGGAAGGCCCAGTTTCCTAACTCCAGGGCAAAAAGATGAACTGTGCCAACGCATTTTTCGCTTGGGAGATGTTGGTATGCCTCTTACATCGAAAGTGATAAGACGCGCGGTATTTCCTTATTGCGAAAATAATGACTTATCTAATCCATTCAATGTTGCAAATAGGTTGGCTGGACTCAATTTTAAACCTTTTCAAACATATTGGGACGAGGAGGTGCTGTTATTTTGGACCAACAAACCTGATCGCACGATCACCAAatatacatttggaacaattttttcaAGGGTGTGGGCGAGGGCAACAACTCCTGAAAATGTGATGTCGGGTTTTCGTGCAACGGGCATCTATCCTTACAACCCAAACGCAATCCCTGATTGTGCTTATGCCCCGTCGGAAATCACAGAAAAAGATGACATTCAAGCAGTCAATGTTGAACATCTCGGAAGTCCACCAGCTGTAAATGAAAGTAGTTTAGTTTCGGGAGAGGAAAATAACAATGAAGATGAACCAGACGAAAAAATAAAGGATGTCATGTAG
- Protein Sequence
- MPPKRARWPETQLQRAMDEIDVGMSVRQASREFKIPRRTLRNHVATRSTKNKLGRPSFLTPGQKDELCQRIFRLGDVGMPLTSKVIRRAVFPYCENNDLSNPFNVANRLAGLNFKPFQTYWDEEVLLFWTNKPDRTITKYTFGTIFSRVWARATTPENVMSGFRATGIYPYNPNAIPDCAYAPSEITEKDDIQAVNVEHLGSPPAVNESSLVSGEENNNEDEPDEKIKDVM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00066253; iTF_00066259; iTF_00066261; iTF_00066260; iTF_00065756;
- 90% Identity
- iTF_00066253;
- 80% Identity
- -