Basic Information

Insect: Amphimallon solstitiale
Gene Symbol: -
Assembly: GCA_963170755.1
Location: OY720677.1:73076981-73080781[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 8.3e-09 4.5e-07 32.7 0.0 2 39 17 55 16 60 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	8.3e-09	4.5e-07	32.7	0.0	2	39	17	55	16	60	0.93

Sequence Information

Coding Sequence: ATGGTGCGAACATACAAAAGAAAACATCATACTGAGCCAGAAATTCCTAGAGATATCTTGAAAAATGCGGTGAAGAATGTCATCAACAAGAGTATGTCTTTGAGAGCTGCTGCAATGAGATTCAATATACCTAAATCAACTTTATTTGACAGAGTTGTGAGAGCTAGAAAGCGTTCCAATAATAACATGGAAGACCCTGGAAATGAAGGTGGTGAATCAGAGGAAGAGCTCGCTTCCTCAAAATATGCAACACGGCAAGTGTTTTCACAAAAGGAAGAAATCGAGCTGGAGATATATCTCAAGAAGTGTTCAAAGATATGTTACGGCTTGACATATGATCTCTGTCGTGGACTGGCTTTCCAATATGCCTCAAAACTGAATAAGAAAATTCCGAGAAATTGGGAAATCAACAAAAAAGCAGGAATTGACTGGATGCAATGTTTTATGAAGCGCCATCCAAGGCTTTCTAATCGCAAACCGGAAAATACAAGTATAGCAAGAGCATCAGCTTTAAACAGAGCCAATGTGgaggaatttttcaataattataccTCAGTGCAAACCAAATATAATTTCTCACCAGATCGTATATGGAACACTGATGAAACAGGTATAACCACAGTGCTTCAAGCACCGAGAGTGATAGCAGAGAAAGGATCAAAAGCTGTAGGACAATGCGTATCTGCTGAACGAGGAGCTCTTGTCACGATGTGTGGAATAATATCTGCTGTTGGGGCTTCAATTCCACCCCTTTATATCTTTCCTCGTGTGAGGATGAAGGATCAGTTTTTATACGGTGCTGTTCCTGGGGCTATTGGGTATGCTGAGAAATCGGGATGGATGTCGACAAGGGTGTTTCTTAAACTGTTGGTGCATATAAGAAAACATACGAACAGTAGCTCCTCAAATAAAATTCTGCTGCTGATGGACAATCATGAGACACACGTTTCTATTGATGCCATCTTGTATGCAAGAGAACACGGAATTGTATTATTGTCGTTCCCGCCACATTGCACGCATAAAATGCAGCCACTGGATAAGGCAGTGTATGGTCCACTCAAATCCAAATGCAAGGTTTCTTTCAATGATTTCATTCTGTCGAACCCTGGTAAACCGATAACTATTTATGATGTTGCCAAGTTGTCAGCACAACCATATTTGCAAACATTCACTCCCTGTAACATTATAAGTAGTTTCAACAGTACTGGCTTATGGCCTATTAACTCCTTAGTTTATAAAGACGATGATTTCTGTGCCTCATTCGCGACGGACCGTCCTCTTGAAAATACAGATGGGGAGTCTTCCCAAAAGATAGTCGACACAAGTATCGTTGCTCAGCCTCACTCCCATGAAAACATTCCATGCTCCTCAAATAATCATGAAGATACCGTAAgggaaatattgaatataatacTATATGAAGCTACCAAACCCAAAATTAATGTAATATCTGTTGTATCTGTTGTCAAACCATCAGATGTGAAACCCTTACCGAAGGCTTGTCCTAGAAACACTAACAGGAAATCAAGAAAGGGAAAATCGAGAATTTACACCAGTACTCCTGAGAAACAAAGAATCGAAGAGTTGGAGAAAGCCAAATTGATGAATGGGAAAAAAACAAACGTTTCGAAAAAATTGGTATCTGAATCTAAACCGAAGAaaatacaaagaagtaagcaacCACAGaggagaaagaagaagaaagcaCTTTCAGATTATATTTCATCATCAGATTCTGATATTGATTTACCTTTAATATCCACGAAAAAATTTAGAAACGATTTATCCGACTCTGATATGGATTTGGATTATGACAGTCATGCTGATGAGTTTCTTGAACTATTAGATGACGAGAAAATCATCAAAGATgattatttattagtgaagttcaCAACAAAAAAAAGATCCCTACACTATGTTGGAAAAGTGATAGATGTAACGGAAAATGGGGAATTCGaagttacatttttgaaaaagtgtATAAAAGGATTTGTTTATCCAAAAGTTGAGGATATTTCATACATTGAGAGGAAAGACGTATCAAAATTACCTAAGCCCATGTCAACACCGGGGTCTTCAAGAATGGCATCTTTTCTAAAgttcaatAATTTGACTTTCGCATGGAATACCGGCGGGGGCATTGATAACGTAACTGCCGACGTGCTATCGCGATACGCCATTAGAGGAAACAACATAATAAAGCCACAGCGTGGTAATAACATCGATATTTGTTTGGTTAAGCTAACCGACAACTATGTAGATTTACGGAACCGATTTAAGCAGTTGAAAACGGATCAATTAGCAGATCAGCAAATATCGTCAAAAATAGACATCCTCCTAAAGCATTTACAGAAAAACGTCAAAATTCTTAATCAGAAGGAATTAAAAATCGCTACATGGTTCACACTACATGAGGATTTGTTGTTTAAGCGAGGGGATAATAGTAACCCAGGGTTTAAGCATTGTGTTCCCAAAGAACAAGTTATTGAATTGGTGTTAGCTCAATATCGTGACATTGGCCATTTCGGTAAATCTAAAACATATAATCATATGCGAGGTAAGTTCTACTGGCCTAAAATGCAAGAACATATACGGCGCATTGTGTCGAGTTGCGAATTATGTCAGAAAGCGAAGTGCAGCAGAAAAACCAGAGAACTGATGAATCCTATAGTAGTTGATAAGCCAGGCTAG
Protein Sequence: MVRTYKRKHHTEPEIPRDILKNAVKNVINKSMSLRAAAMRFNIPKSTLFDRVVRARKRSNNNMEDPGNEGGESEEELASSKYATRQVFSQKEEIELEIYLKKCSKICYGLTYDLCRGLAFQYASKLNKKIPRNWEINKKAGIDWMQCFMKRHPRLSNRKPENTSIARASALNRANVEEFFNNYTSVQTKYNFSPDRIWNTDETGITTVLQAPRVIAEKGSKAVGQCVSAERGALVTMCGIISAVGASIPPLYIFPRVRMKDQFLYGAVPGAIGYAEKSGWMSTRVFLKLLVHIRKHTNSSSSNKILLLMDNHETHVSIDAILYAREHGIVLLSFPPHCTHKMQPLDKAVYGPLKSKCKVSFNDFILSNPGKPITIYDVAKLSAQPYLQTFTPCNIISSFNSTGLWPINSLVYKDDDFCASFATDRPLENTDGESSQKIVDTSIVAQPHSHENIPCSSNNHEDTVREILNIILYEATKPKINVISVVSVVKPSDVKPLPKACPRNTNRKSRKGKSRIYTSTPEKQRIEELEKAKLMNGKKTNVSKKLVSESKPKKIQRSKQPQRRKKKKALSDYISSSDSDIDLPLISTKKFRNDLSDSDMDLDYDSHADEFLELLDDEKIIKDDYLLVKFTTKKRSLHYVGKVIDVTENGEFEVTFLKKCIKGFVYPKVEDISYIERKDVSKLPKPMSTPGSSRMASFLKFNNLTFAWNTGGGIDNVTADVLSRYAIRGNNIIKPQRGNNIDICLVKLTDNYVDLRNRFKQLKTDQLADQQISSKIDILLKHLQKNVKILNQKELKIATWFTLHEDLLFKRGDNSNPGFKHCVPKEQVIELVLAQYRDIGHFGKSKTYNHMRGKFYWPKMQEHIRRIVSSCELCQKAKCSRKTRELMNPIVVDKPG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -