Asol123842.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720682.1:541932-543917[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6e-09 3.2e-07 33.1 0.0 1 40 18 58 18 63 0.86
Sequence Information
- Coding Sequence
- ATGCCGAGAAAGTACGTCAGGAAAACCAATGCTGTTCCTAGAGCTACATGGTCAGAAGAAAACCTCAACACAGCCATAATAATGGTATCAACTAGGGCCATGGGGGTGAACCAGGCTAGCCGCTTCTACAATATCCCGTCTCGAACCTTAAGAAGGAGGATAAAAAGTGGTGATGGAACAAAAAAACCTTTGGGAAAACCACCAGCACTAggatttcaaaatgaaaaaagatTAGTCGCCCACATCAAACGATTGGAAGAAGCAGGTTTTGCTCCATCGCGTCGAACTACTAGACAACTCGCATTCGAATTTGCTAAAAAACTAGGCAAACAAAAGGCACTGCTCAGTAAGAATTCGAAAGAAAACAAAACTCTAGCAGGCCCTCACTGGCTCTATTCGTTTTTAGAAAGACATCCAGAACTATCTGTGCGGCAATCAGAAGGTTTATCTTTGGCTCGTGCCAAAGGAATGTGTCGCGAAGAAGTGAACAATTTTTTTGCTTTATTGCAAAACACACTTGAACAAAATAACTTAATGGATAAACCTGCATCAATATATAACATGGATGAGTCGGGTATCCAACTGAACAATCAGCCTGGCAAAGTTATTGCGACTAAAGGAAGTAAGGACGTTCATGTTTTAACATCTGTGGAAAAAGGAGAGAACGTTACAATTGTAGCTTGTTGCAATGCCGAGGGAACGTTTTTGCCTCCAGTACTAATTTTGAAGGGAACTCGTAAGAAGATGGAGCATTTAAAAGATTTGCCACCTGGCTCGGACATCTACATGAACAAGCAATCGTCGTACATTAATACAGACCTGTTCCTAAAATGGTTTAAAGAACATTTTCTTCCTAGAAAAAGTCCTGGCCAGGCTCTTCTAATTTTAGAATTGTTAGAGATTGCAGATCAAAATAATGTGATTCTACTGTGCTTGCCTAGTCACACCACCCAAGCTTTGCAACCACTAGACAGGTCATTTTTTAAGCCATTAAAAGATTATTTTAGAGAAGCTGctcaaaattttatgtttattcatAAAGAAAGGAAGATAGATAGGATGAGCGCAGGAAAATTGATTGGAGAAGCATGGAATAAGGCCAGTACAGTCGGAAACGGTGTATCTGGATTTCAAGCAACGGGGATTTTTCCTTTTAATCCGAGTGCAGTTCCTGaccattttttcaaaatatcggaTGTGGCAAACAGATTTGTTCTCCCGGAACAACAGGACCAAAATCGTACGACTGAAGGCTCAAATGCTGTGATCGATTTTACTTTAAGGAATGACTTAGAGCAAAATGGTAACAACTATAGCGAAGTTGAAATGGAACCATTTCTAAATGTTGATGAGTTACCAGAAAACTTTTTCGATGACTCagacaattttattatgattcctAATATCACGGATAATAGTGATGACGCGACTGCGACTGAGACTGAGAATTCTCATTCTCAAAGTTTACAAGTTGAAATTATTGATGAGCAACAAAATTCTACAGAGACGGAATCTCAAAGTGTTCAATCTGATGCAATCGTAGAAACTCCGTCAAAATATTTAGAAGATATTGCGCCGATTCCATCAATTcctcaaagtaaatttaataaaaggaaACAGTCAGCCGAAATTTTAACTTCACAAGACTTTAtggataagaaaaagaaaaatactgataCCACAGgaaaaaaagttgttcaaaaGGAAAAGTCAAAAGGTGaagtaaaagaaactaaaaaagaaaaaaacaaactaaTGGGTAAAAATGGGAAAACACAAAAAAGAGACGATGCAAAAGATTCCCAAGATGATGTAGACTGCATTGAGTGCCTGGAAAATTATCTATCTACGAAAGAGACAGTTGACTGGATTCAATGCATTGACTGTGAATTGTGGTTGCATGAAACTTGCACAATGTACAACCCCCGATGCAATAATTGTGGAAAAGTTAAGAAAAGGTTAGACACTGTAAAGAAGAAGTTGTAG
- Protein Sequence
- MPRKYVRKTNAVPRATWSEENLNTAIIMVSTRAMGVNQASRFYNIPSRTLRRRIKSGDGTKKPLGKPPALGFQNEKRLVAHIKRLEEAGFAPSRRTTRQLAFEFAKKLGKQKALLSKNSKENKTLAGPHWLYSFLERHPELSVRQSEGLSLARAKGMCREEVNNFFALLQNTLEQNNLMDKPASIYNMDESGIQLNNQPGKVIATKGSKDVHVLTSVEKGENVTIVACCNAEGTFLPPVLILKGTRKKMEHLKDLPPGSDIYMNKQSSYINTDLFLKWFKEHFLPRKSPGQALLILELLEIADQNNVILLCLPSHTTQALQPLDRSFFKPLKDYFREAAQNFMFIHKERKIDRMSAGKLIGEAWNKASTVGNGVSGFQATGIFPFNPSAVPDHFFKISDVANRFVLPEQQDQNRTTEGSNAVIDFTLRNDLEQNGNNYSEVEMEPFLNVDELPENFFDDSDNFIMIPNITDNSDDATATETENSHSQSLQVEIIDEQQNSTETESQSVQSDAIVETPSKYLEDIAPIPSIPQSKFNKRKQSAEILTSQDFMDKKKKNTDTTGKKVVQKEKSKGEVKETKKEKNKLMGKNGKTQKRDDAKDSQDDVDCIECLENYLSTKETVDWIQCIDCELWLHETCTMYNPRCNNCGKVKKRLDTVKKKL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00066179; iTF_00067335; iTF_00066316; iTF_00066286; iTF_00066707; iTF_00066275; iTF_00066568; iTF_00066313; iTF_00066257; iTF_00066546; iTF_00066295; iTF_00066300; iTF_00066304; iTF_00066287; iTF_00066262; iTF_00066231; iTF_00066292; iTF_00066010; iTF_00066876; iTF_00066736; iTF_00065816; iTF_00066250; iTF_00066251; iTF_00066236; iTF_00066622; iTF_00066303; iTF_00066305;
- 90% Identity
- iTF_00066305;
- 80% Identity
- -