Asol074088.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720678.1:25440098-25441606[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.3e-09 2.3e-07 33.6 0.0 1 36 18 53 18 60 0.89
Sequence Information
- Coding Sequence
- ATGCCACGCCAATATAAAAGAAAGCTGGGGGCACCCCTGCGTAGACAGTATTCAGAAGACCAGCTGGAAGCAGCTCTCGAAGCTGTTATTTTAAATGATATGTCTCTGCGGCAAGCATCAGAGCAATTTAATGTCCCACGGAACACGATATTCAGAAAATACCATGGCATGAATGGGGACAAACTAGGAAGACCACCAGTTTTAAACCCAGGTGAAGAACTTCAAATTACAAATGCTTTGACCACGGCGGCGAATTTTGGATATCCTTTTACCGAAAACGACTTAAAGGTGTTTGTCCCACATTATCTGAATAATAAAGGTGGTCAAACAATATATCCAAACAATTTACCGGGATCAGAttgggtaaaatattttttagcaAGAAATCAAGAGCTCTCAATCAGATTTTCTGAAAACATAAAGCGGGCTCGCGCGGATTTATCAATTGAGGTGCTGCAGAGATATTTCAATAATCTCCAAGTAACACTTGAGGGGGTTCCcccagaaaatataataaattacgatgAGTCCAATTTGACGGATGATCCCGGTAAAGAACGGGTATTTGTCAGGAGAGGCAGTAAACGCGCCTCGCGTATACTAGATAGTTCAAAAAGTTCTACCTCAGTAATGTTCGCAGCGAGTGGTGATGGGGTGCTGTTACCACCCTACGTTGTCTATAAGGCTGTGAATTTGTACCCAGAATGGATTCTAAATGGACCGGAAGGCACAGTATACAATCGGTCAACTAGTGGGTGGTTTGATTCTGTCCTTTTCGAAGACTGGTTTGATAAAATAGCACTGCCTTTTCTAAGGCGAAAAGAAGGCGTGAAAGTGCTTATTGGTGACAATTTAAGTAGCCACATGTCAGTTCGTATTATACAAACGTGTAAGGCAAATAATATCTTGTTTGTGTTGTTGCCGCCAAACAGCACTCACCTGTGCCAACCCTTAGATGTCGCCGTGTTCAGACCTATGAAAATAGCATGGCGTAATATTTTAACGAAGTGGAAATTGAAGCACAGAGGCACTGTCCCAAAAGCCACCTTTCCGAGCCTGCTCAAAGAGTTATTAGTGATGTTGAGGTCAAATTTATCGGTTAACATAAAATCTGGCTTTGcagcaacttcaatcattccggTTGATCCGAAGAGAGTGCTAAATAAGGTTTTGGGTAAACCAGACGACCCCATCGATAATAACGCGTTAACCCAATCATTTATTGAAATAATAGAAACACGAATTGGAATAGAAGAGAAACACACACtcaaacgaaaaaagaaaatcaatgttGAACCTGGACAGTCAGTTAAATGTTCTGACTTTAATACACAACAAGAAGACATCCAAGAAATAGAAGAAGGAGAAACCCAAGAAATGGAAGAAGGAGAAATCCAAGAAATGGAAGAAACACAAAATGAAGGGACTTCTTCCAGTTTTAACGCCGTTCCTATTGCTAGACGCCAAAGTACGACATTCATCAGACCTGAAAATAATTGTGATGCATGA
- Protein Sequence
- MPRQYKRKLGAPLRRQYSEDQLEAALEAVILNDMSLRQASEQFNVPRNTIFRKYHGMNGDKLGRPPVLNPGEELQITNALTTAANFGYPFTENDLKVFVPHYLNNKGGQTIYPNNLPGSDWVKYFLARNQELSIRFSENIKRARADLSIEVLQRYFNNLQVTLEGVPPENIINYDESNLTDDPGKERVFVRRGSKRASRILDSSKSSTSVMFAASGDGVLLPPYVVYKAVNLYPEWILNGPEGTVYNRSTSGWFDSVLFEDWFDKIALPFLRRKEGVKVLIGDNLSSHMSVRIIQTCKANNILFVLLPPNSTHLCQPLDVAVFRPMKIAWRNILTKWKLKHRGTVPKATFPSLLKELLVMLRSNLSVNIKSGFAATSIIPVDPKRVLNKVLGKPDDPIDNNALTQSFIEIIETRIGIEEKHTLKRKKKINVEPGQSVKCSDFNTQQEDIQEIEEGETQEMEEGEIQEMEETQNEGTSSSFNAVPIARRQSTTFIRPENNCDA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00066178; iTF_00066054; iTF_00065911; iTF_00065605; iTF_00066067; iTF_00066099; iTF_00066148; iTF_00066102; iTF_00066135; iTF_00066142; iTF_00066326; iTF_00066103; iTF_00066325; iTF_00066074; iTF_00066111;
- 90% Identity
- iTF_00066153;
- 80% Identity
- -