Asol083457.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720678.1:129361366-129361710[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-09 1.5e-07 34.2 0.0 3 40 14 51 12 54 0.91
Sequence Information
- Coding Sequence
- atgcCTAACCAAGAGAGAAAGAGGAAAAAATGGGACACAGAATCGATGAAACTTGCAGTAGCTACAGTAAAAGAGAAAAGAATGGGATATTTGAAGGCATCTAAAACCTACGGGGTACCTAGGTCAACACTTGAGAATTacgttaataacaaagaaaaagatgTTAATGAGCTAATAAACACAAGACTGGGTAGAAAGAGCGTGTTGGGAGAAGAGCTAGAAAGAGAATTACTGCAATATTGCATAAAGATGGAGGAACGGTTTTATGGAGTTACTCTTCGTGATATTAAGCAACTAGCTTTTCAGTTGGCAGTCAATAACAATATGGAACACCCTTTTACCTAG
- Protein Sequence
- MPNQERKRKKWDTESMKLAVATVKEKRMGYLKASKTYGVPRSTLENYVNNKEKDVNELINTRLGRKSVLGEELERELLQYCIKMEERFYGVTLRDIKQLAFQLAVNNNMEHPFT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00066223; iTF_00066383; iTF_00065731; iTF_00065821; iTF_00067592; iTF_00065792; iTF_00066845; iTF_00065760; iTF_00065764;
- 90% Identity
- iTF_00065821;
- 80% Identity
- -