Asol027601.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720676.1:4209681-4219614[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-09 1.4e-07 34.3 0.0 1 36 18 53 18 60 0.89
Sequence Information
- Coding Sequence
- ATGCCACGCCAATATAAAAGAAAGCTGGGGGCACCCCTGCGTAGACAGTATTCAGAAGACCAGCTGGAAGCAGCTCTGGAAGCTGTTATTGTAAATGATATGTCTCTTCGGCAAGCATCAGAGCAATTTAATGTCCCACGGAACACGATATTCAGAAAATACCATGGCATGAATGGGGACAAACTAGGAAGACCACCAGTTTTAAACCCAGGTGAAGAACTTCGAATTACAAATGCTTTGACCACGGCGGCGAATTTTGGATATCCTTTTACCGAAAACGACTTAAAGGTGTTTGTCCAACATTATCTGAATAATAAAGGTGGTCAAACAATATTTCCAAACAATTTACCGGGATCAGAttgggtaaaatattttttagcaAGAAATCAAGAGCTCTCAATCAGATTTTCTGAAAACATAAAGCGGGCTCGCGCGGATTTATCAATTGAGGTGCTGCAGAGATATTTCAATAATCTCCAAGTAACACTTGAGGGGGTTCCcccagaaaatataataaattacgatgAGTCCAATTTGACGGATGATCCCGGTAAAGAACGGGTATTTGTCAGGAGAGGCAGTAAACGCGCCTCGCGTATACTAGATAGTTCAAAAAGTTCTACCTCAGTAATGTTCGCAGCGAGTGGTGATGGGGTGCTGTTACCACCCTACGTTGTCTATAAGGCTGTGAATTTGTACCCAGAATGGATTCTAAATGGACCGGAAGGCACAGTATACAATCGGTCAACTAGTGGGTGGTTTGATTCTGTCCTTTTCGAAGACTGGTTTGATAAAATAGCACTGCCTTTTCTAAGGCGAAAAGAAGGTGTGAAAGTGCTTATTGGTGACAATTTAAGTAGCCACATGTCAGTTCGTATTATACAAACGTGTGAGGCAAATAATATCTTGTTTGTGCTGTTGCCGCCAAACAGCACTCACCTGTGCCAACCCTTAGATGTCGCCGTGTTCAGACCTATGAAAATAGCATGGCGTAAGATTTTAACGAAGTGGAAATTGAAGCACAGAGGCACTGTCCCAAAAGCCACCTTTCCGAGCCTGCTCAAAGAGTTATTAGTGATGTTGAGGTCAAATTTATCGGTTAACATAAAATCTGGCTTTGcagcaacttcaatcattccggTTGATCCGAAGAGAGTGCTAAATAAGGTTTTGGGTAAACCAGACGACCCCATCGATAATAACGCGTTAACCCAATCATTTATTGAAATAATAGAAACACGAATTGGAAAAGAAGAGAAACACACGCtcaaacgaaaaaagaaaatcaattttGAACCTGGACAGTCAGTTAAATGTTCTGACATTAATACACAACAAGAAGACATCCAAGAAATAGAAGAAGGAGAAACCCAAGAAATGGAAGAAGGAGAAATCCAAGAAATGGAAGAAACACAAAATGAAGGGACTTCTTCCAGTTTTAACGCTGTTCCTATTGCTAGACGCCAAAGTACGACATTCATCACACCTGAAAATAATTGTGATAATATAGCTAAGAATAGCTTTGTACTCATAAAGTTTATTTACAATGCAGGAACCAAAAAACAAACTGAGAAAAAATATGTTGCTCAAGTGCTAGAGAATTATAAGACTGACCAGAAATTAAAAatggccagagaagaaaaaaagaaattatctgTTTATCAAAACTTGCTTAACAAGCGAAAACGGGAGGAAGACTTGGAGAAGAGCAATTTAAAAGTTACTAACTTTTTTCGGAAGCTCACACATTTTCAAGACAGTACTTCTACTGATAACAGTGGTTTTCCCTTTCCATCAACATCAAAGTTGCCATCAGAATTAGAGAAGCAAGCCAATGAGGATGAGGATCCGATAGATTCAGGTTCTGATACGTTTCAGTCGGTACCATCATGTTCGAGTAAGCAAGACGAATCATCCGAAGACGCGTATTCGCCCCTCTCTAACGATCCAGGTCTTTGGCCGAGTATATTGTCTCCAACCCAGGTGCAAGAACTAGTCAAAAAAGGTCCTAtgtaa
- Protein Sequence
- MPRQYKRKLGAPLRRQYSEDQLEAALEAVIVNDMSLRQASEQFNVPRNTIFRKYHGMNGDKLGRPPVLNPGEELRITNALTTAANFGYPFTENDLKVFVQHYLNNKGGQTIFPNNLPGSDWVKYFLARNQELSIRFSENIKRARADLSIEVLQRYFNNLQVTLEGVPPENIINYDESNLTDDPGKERVFVRRGSKRASRILDSSKSSTSVMFAASGDGVLLPPYVVYKAVNLYPEWILNGPEGTVYNRSTSGWFDSVLFEDWFDKIALPFLRRKEGVKVLIGDNLSSHMSVRIIQTCEANNILFVLLPPNSTHLCQPLDVAVFRPMKIAWRKILTKWKLKHRGTVPKATFPSLLKELLVMLRSNLSVNIKSGFAATSIIPVDPKRVLNKVLGKPDDPIDNNALTQSFIEIIETRIGKEEKHTLKRKKKINFEPGQSVKCSDINTQQEDIQEIEEGETQEMEEGEIQEMEETQNEGTSSSFNAVPIARRQSTTFITPENNCDNIAKNSFVLIKFIYNAGTKKQTEKKYVAQVLENYKTDQKLKMAREEKKKLSVYQNLLNKRKREEDLEKSNLKVTNFFRKLTHFQDSTSTDNSGFPFPSTSKLPSELEKQANEDEDPIDSGSDTFQSVPSCSSKQDESSEDAYSPLSNDPGLWPSILSPTQVQELVKKGPM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00066146; iTF_00066150; iTF_00066121; iTF_00066154; iTF_00066133; iTF_00066145; iTF_00066115; iTF_00066376; iTF_00066153; iTF_00066765; iTF_00066127; iTF_00067027; iTF_00066141; iTF_00066144;
- 90% Identity
- iTF_00066153;
- 80% Identity
- -