Asol018671.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720675.1:167620400-167622229[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-09 8.2e-08 35.0 0.0 1 38 18 55 18 58 0.93
Sequence Information
- Coding Sequence
- ATGCCTCGAAACTATCGTAAAAAGTTGGGACCACGTGGAAATAGAAACTATGATCCAGAGTACCTCAACAGGGCAGTATCATCGGTTCGCCGAGGAACTCTGAGCATAAGACAAGCTTCTGAACAGTACGCAGTTCCTTATACGACACTAAACCGATGGGTGAAAAACAACGATCTTTTGGCTTACGGTAGACCGCCAGTCCTTGGACCTTTGGAGGAAGCCAGATTGGTCGAAGCTCTTTTAACTTGTGCCGAGTGGGGTTTTCCTATGAAGAGTTATGATGTAAGGTACCTAGTGCaacaatatttaaacaaatgtgGAAAACGGGAAAAAAGGTTTAAAAATAACTTGCCTGGATTAGATTGGTTTAAGTCATTTATGCGAAGACacccaaatttgacaattaagttTGCTGAAAATACAAAAAGAGTCAGGGCGGCTGTGACTTACGAAGTTGTAGAGGCATATTTCGCCAATCTAGAAAGTTCTTTAGTGGATGTGCAACCGTTCAATATCTTAAATTATGACGAAACGAATTTCGCCGATGATCCAGGTACTGTGAAGGTTGTAGTCAGGCGAGGAATAAAACATGCTCATAGAATAATTGACACATCCAAGTCGAGCATTAGTGTTATGTTCTCAATATCAGGAGATGGAACTTTACTACCACCTTATGTGGTGTACAAAGCGAAACACTTATACCCAGGGTGGACGGAGGGTGGGTTTCCTGGTTCAAGATATAACCGCACAATGAGCGGCTGGTTTGACTCAACCACATTTGAAGACTGGTTTTCATCAATAGCCCTGCCATATCTGCGGAATCTAGATGGACCCAAAGTTATTATTGGAGACAACCTCTGTAGCCATCTAACAGTAAGCGTTATTGAAGAGTGCGAGAAGAATAATATTCGATTTATTCTACTACCCCCAAATTCCACTCATCTTCTCCAGCCTCTTGATGTGGCATATTTCCGGCCCTTCAAGGGAGCGTGGCATAATGTCTTGGAGGAGTGGAAATTAAAAAACCGAGGTGTGTTGCCTAAAACAGAGTTTCCTAGGCTGCTTAATAAAACAATAGAAACAATTGGAGTAAAATCAACGACCAACATACTGGCCGGTTTCAAGGCTTGCGGAATTGTGCCATTTAATCCGGACGTAGTTTTACGAAAAATAGTTCGCATTAGACCCCAACAAGAACCTGAAGAGGCCGAGAGGGCAATGGACGCAAGTTGGACTGATGTCATTGTGACACATCTCAGTAGCATGCGATCTTCTGAAAAGGTGACTTCCAGAAGAGGAAAAAGAAGGGACGTTGCAGCTGGAAAAAGTATTACGGCAGCTGATCTCCTACCAACGTTAATTGAACCAGAGAAACCCGAACTTGATAACGACAACCATACTGACGAGGATGAAAATCGCGACGAAAACAGTAACAAGCCTGAAGAAGAAGAATATGAAGAGTCTGAAGAACATGCAGAGCAACACATTCAGAGTGCAACTGTTGATCCTGACAATTTGCCATCAACATCGCAATCTGAGGATCATCATGATATGAATAATTGTGGCCCCGGAGATTTTGTTATCgtcaaatttgaaacaaataagaGAGACAGCCTGTACATTGCAAAAATCGAGTCTGAAAACGACGGTGAATTTTCAGTAAATGTCTTGAGGAAGAAACATGGTGCCAAAGAAGTTGTGTTTGTCTACCCAAATGTTCCAGATTTGACTGTTGTTAAAAAGTGCCAAATAATTCAAAAAGTGTTCAGACATCTTGGCAGAAGAAACCAAATGACTTTTGGGGCTATTTCTAACTTTTGTCTAGAGTAG
- Protein Sequence
- MPRNYRKKLGPRGNRNYDPEYLNRAVSSVRRGTLSIRQASEQYAVPYTTLNRWVKNNDLLAYGRPPVLGPLEEARLVEALLTCAEWGFPMKSYDVRYLVQQYLNKCGKREKRFKNNLPGLDWFKSFMRRHPNLTIKFAENTKRVRAAVTYEVVEAYFANLESSLVDVQPFNILNYDETNFADDPGTVKVVVRRGIKHAHRIIDTSKSSISVMFSISGDGTLLPPYVVYKAKHLYPGWTEGGFPGSRYNRTMSGWFDSTTFEDWFSSIALPYLRNLDGPKVIIGDNLCSHLTVSVIEECEKNNIRFILLPPNSTHLLQPLDVAYFRPFKGAWHNVLEEWKLKNRGVLPKTEFPRLLNKTIETIGVKSTTNILAGFKACGIVPFNPDVVLRKIVRIRPQQEPEEAERAMDASWTDVIVTHLSSMRSSEKVTSRRGKRRDVAAGKSITAADLLPTLIEPEKPELDNDNHTDEDENRDENSNKPEEEEYEESEEHAEQHIQSATVDPDNLPSTSQSEDHHDMNNCGPGDFVIVKFETNKRDSLYIAKIESENDGEFSVNVLRKKHGAKEVVFVYPNVPDLTVVKKCQIIQKVFRHLGRRNQMTFGAISNFCLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00065955; iTF_00065970; iTF_00066003; iTF_00066040; iTF_00065977; iTF_00066041; iTF_00066042; iTF_00066044; iTF_00065981; iTF_00066047; iTF_00065984; iTF_00066627; iTF_00065567; iTF_00065508; iTF_00066310; iTF_00065995; iTF_00065998; iTF_00065935; iTF_00066038; iTF_00066039; iTF_00065979; iTF_00065982;
- 90% Identity
- iTF_00066039;
- 80% Identity
- -