Asol021295.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720675.1:198309369-198311209[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.7e-10 3.6e-08 36.2 0.0 1 41 12 53 12 56 0.95
Sequence Information
- Coding Sequence
- atGCCTAGGAAAGGTCTCCAACACAAAAAATGGGATCCAGAAGATATGGAGAAAGCTATTGATGCTGTTAAAAATAAACGAATGGGTTATTTAAAGGCGTCAAGGAGCTTCCATGTGCCCAAAACAACCCTTGAAGTTTACGTCAAACGTGAAAAGCCCTTACAAGAACAATGCACGCTACAAATGGGCCGTAAACCAATTCTATCGCCTGACATGGAAGACGATTTGGTCAAGTACTGTTTAGAAATGGACAAAAGGTATTATGGTATAGGGCTGGCAGACATTCGCAGACTGGCCTACCAGCTTGCAGTTAGAAATAACCTACCCCATCCATTTTCAACAACAACCGCAAATGCCGGCAAAAAATGGTTTCACGCCAGAAAATGTCAAGCTTTTTTTGACCTTTTGGAACCAGCTATGCAAAAAATTAACTTCAATCCCCTTAAAGTCTACAACGTTGATGAAACTGGCATCACCACTGTGCAATCGAAGATTGCTAAAGTGATCACTTTAAAAGGCAAAAAACAAGTGGGAGCCGTAACTGCTGCAGAAAGGGGAGCTCTGGTAACTGTAGTTGCATGTATGAATGCTGCCGGAGGATTTGTCTCTCCGTTATTCATCTTTCCGAGAAAGAATATGAAGGCCGAATTATTAGACGGAGCTCCGCCTGGGTCGATTGCTGACTGTCATCCTTCAGGGTGGATACAAAGCCACATCTTTCTGCGATGGATGCGACATTTTATCGATAACGTGAAACCTTCAAAACAGGACCCCGTGTTGCTCATCCTCGACGGGCACTACACACATACTCGGAACCTGGATGCTATAGAATTAGCTAAAAAACATTTCATTGAAATTGTCTGCATACCGCCCCACACCTCACATAAGATACAGCCATTGGATTTGTCTTTTATGTCGCCGTTAAAAACATACTACTCAAGAGAAGTCCAAAATTGGCTAAAACATAACCCTTCCCGAAGCCTGGGCCCCTTCCAAATATGCAAATTGCTCTGCCCTGCTTATCAGAAATGTGCGACAGCTGAAATAGCAGCCAGCGGGTTTCGAAAAGCGGGAATTTTTCCATTCAATCGGGACATATTTTCAGAAGCTGACTTTCTAATAGAAAGACAACGAGAGCGAACACCGCCTAGACAACAGACCTCAGATATCAGTTCTATTCCCGAACCATCAGAGAGTTCACTTCAATCATCTATTGAAAGTACTCCTCCGAAGCACAAAAAGGATAGCGATATTGGAACTAAACAGCTGTCAAACGTTGTCAAAGTTCAAGACTTTTCGCCTTTGCCATGCTGCAGTTCGGTACCTACCACAAATCGGGGTCGTAAAGCTAGTTCCGCAGCGGTAATAACAAGTACGCCCTACAAAGATGCTTTAGAAGCTAGTATGAGAGAGCAAGAACGAAAacaatctatcaaaaataaaaaaataccaaaaCTAAAATCCTTGACAAAAAGAAAGAACAAGACGAATAAAAAAACTAAGAAGATAAAGAAGAGTCAAAAGGTTGAAGAAGAAAGTGAATCATCCTCAGATTCCTTAGAAGATATCTCTTATGCTGATGATTCAGATATGGATGTAGATGACAACGGTGACGCAGAGTGTATTTTCTGCACAGGAAAATTTTCAGAGGATCAACATGGAGAGGCCTGGATACAGTGCTCAATATGTTTCCGTTGGGCACATGAGGATTGTGCTGCTAGCGACAAAAAGAAAGTTTATGTGTGTGACTTATGCAGTGAGTGA
- Protein Sequence
- MPRKGLQHKKWDPEDMEKAIDAVKNKRMGYLKASRSFHVPKTTLEVYVKREKPLQEQCTLQMGRKPILSPDMEDDLVKYCLEMDKRYYGIGLADIRRLAYQLAVRNNLPHPFSTTTANAGKKWFHARKCQAFFDLLEPAMQKINFNPLKVYNVDETGITTVQSKIAKVITLKGKKQVGAVTAAERGALVTVVACMNAAGGFVSPLFIFPRKNMKAELLDGAPPGSIADCHPSGWIQSHIFLRWMRHFIDNVKPSKQDPVLLILDGHYTHTRNLDAIELAKKHFIEIVCIPPHTSHKIQPLDLSFMSPLKTYYSREVQNWLKHNPSRSLGPFQICKLLCPAYQKCATAEIAASGFRKAGIFPFNRDIFSEADFLIERQRERTPPRQQTSDISSIPEPSESSLQSSIESTPPKHKKDSDIGTKQLSNVVKVQDFSPLPCCSSVPTTNRGRKASSAAVITSTPYKDALEASMREQERKQSIKNKKIPKLKSLTKRKNKTNKKTKKIKKSQKVEEESESSSDSLEDISYADDSDMDVDDNGDAECIFCTGKFSEDQHGEAWIQCSICFRWAHEDCAASDKKKVYVCDLCSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00065827; iTF_00065891; iTF_00066242; iTF_00065862; iTF_00065863; iTF_00065864; iTF_00066645; iTF_00065846; iTF_00066554; iTF_00065858; iTF_00066856; iTF_00065835; iTF_00066158; iTF_00065872; iTF_00066069; iTF_00066682; iTF_00065856;
- 90% Identity
- iTF_00065891;
- 80% Identity
- -