Asol062136.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720677.1:89730408-89731070[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.8e-10 3.7e-08 36.1 0.1 4 42 19 57 16 60 0.92
Sequence Information
- Coding Sequence
- atgccCACCAAATATAAACGGAAATGCCCTGATAGGGGCAAATGGAGCAGTCAACAATTGGAACAAGCCTTAGAGGCAGTTAATAACGGGCACATGGGGATCAATGAAGCGTCCAGAGCATTTGCCATTCCCTCTCGAACTTTAAGAAGAAGAAAAGCTCAACATAATAATTCACAAAAAGTTCCAATGGGCCCTTCGTCTTTGTTCGGCAGAGATAATGAGAAAAAACTAGTTAAACACATACAAAAACTGCAGGCAAGAGGATTTGCACCGTCCATGGACGATTTGAGGAGAACTGCGTTTAAATTTGCCGAATTTTTGGGTATCCAACATCACTTTAACTCAGAAAAAGAAATGGCGGGATACGACTGGATGAATTCTTTTTTACGACGCAATCCGGAGCTGAGTATGAGAAAGTCGGAGGGAGTATCCTTGGCGAGAGCTGAAGGCATGACTAAGCAAAGggttgataattattttcagtTACTTAGCGCTGCCCTTGAAGAACACGAACTAATGGATAAACCGGGGCATATATACAACATGGATGAGACTGGGTTGCAGCTAAATAATAACCCTGGCTTTGTTATAGCCACTAAAGGTTGTGTCTTCAGTTACATCCGGCGAGAAAGGCGAGACAATTACTGTCGTAGTATGCTGTAA
- Protein Sequence
- MPTKYKRKCPDRGKWSSQQLEQALEAVNNGHMGINEASRAFAIPSRTLRRRKAQHNNSQKVPMGPSSLFGRDNEKKLVKHIQKLQARGFAPSMDDLRRTAFKFAEFLGIQHHFNSEKEMAGYDWMNSFLRRNPELSMRKSEGVSLARAEGMTKQRVDNYFQLLSAALEEHELMDKPGHIYNMDETGLQLNNNPGFVIATKGCVFSYIRRERRDNYCRSML
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00065417;
- 90% Identity
- iTF_00065417; iTF_00065906; iTF_00065844;
- 80% Identity
- iTF_00065844;